RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 VSTM1Q6UX27 236 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
HDLBP-239ENST00000483086 FUKQ8N0W3 1084 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 WHAMMQ8TF30 809 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 E2F7Q96AV8 911 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 RNF38Q9H0F5 515 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
HDLBP-239ENST00000483086 GKN1Q9NS71 199 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 TDP1Q9NUW8 608 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-239ENST00000483086 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
HDLBP-239ENST00000483086 TNFRSF10BO14763 440 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 IKBKBO14920 756 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 MAPK13O15264 365 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 CCDC130P13994 396 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 RPS9P46781 194 aaKnown RBP12.86□□□□□ -0.35
HDLBP-239ENST00000483086 NDST1P52848 882 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 AP3M2P53677 418 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 USP4Q13107 963 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 ADAM9Q13443 819 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 ISM2Q6H9L7 571 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 FAM35AQ86V20 835 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 FAM186BQ8IYM0 893 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 CELF5Q8N6W0 485 aaKnown RBP12.86□□□□□ -0.35
HDLBP-239ENST00000483086 SCAMP5Q8TAC9 235 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 NELL1Q92832 810 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 SMOQ99835 787 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 CHRDQ9H2X0 955 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 MMRN2Q9H8L6 949 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 LMAN1LQ9HAT1 526 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 TRPC7Q9HCX4 862 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-239ENST00000483086 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF840PA6NDX5 716 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 DPYSL4O14531 572 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 AVPR1AP37288 418 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 NOP14P78316 857 aaKnown RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 DMWDQ09019 674 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF268Q14587 947 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 PON2Q15165 354 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF658Q5TYW1 1059 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 DENND5BQ6ZUT9 1274 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 GPRIN1Q7Z2K8 1008 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 YAF2Q8IY57 180 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 CSGALNACT1Q8TDX6 532 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 MRPS31Q92665 395 aaKnown RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 EZH1Q92800 747 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 ARID3AQ99856 593 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 LINC00597Q9H2U6 94 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 FAM49BQ9NUQ9 324 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 POLR3BQ9NW08 1133 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 WNT6Q9Y6F9 365 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 CEP250Q9BV73 2442 aa12.85□□□□□ -0.35
HDLBP-239ENST00000483086 MYO18AQ92614 2054 aaKnown RBP12.85□□□□□ -0.35
HDLBP-239ENST00000483086 MAN2B1O00754 1011 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 TRIM66O15016 1216 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 OLFM2O95897 454 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 PSMC2P35998 433 aaKnown RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 MLLT6P55198 1093 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 SATB1Q01826 763 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 IFRD2Q12894 506 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 TAF10Q12962 218 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 CCINQ13939 588 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 MTF1Q14872 753 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 MAPRE1Q15691 268 aaKnown RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 SGSM1Q2NKQ1 1148 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 CBWD6Q4V339 395 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 CBWD3Q5JTY5 395 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 CBWD5Q5RIA9 395 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 INTS8Q75QN2 995 aaKnown RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 ADSSL1Q8N142 457 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 WBP2Q969T9 261 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 ELOVL4Q9GZR5 314 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 IL37Q9NZH6 218 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 UXTQ9UBK9 157 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-239ENST00000483086 MAN1B1Q9UKM7 699 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 SPAG17Q6Q759 2223 aa12.84□□□□□ -0.35
HDLBP-239ENST00000483086 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms