RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ADGRF2Q8IZF7 708 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 ADGRG2Q8IZP9 1017 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 ALLCQ8N6M5 410 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 LRRC52Q8N7C0 313 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 FRMD1Q8N878 549 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 CXorf38Q8TB03 319 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 LARP4BQ92615 738 aaKnown RBP7.91□□□□□ -1.14
CSDE1-206ENST00000483030 GATA6Q92908 595 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 SAAL1Q96ER3 474 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 FUBP3Q96I24 572 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSDE1-206ENST00000483030 PHF12Q96QT6 1004 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 MRPL44Q9H9J2 332 aaKnown RBP7.91□□□□□ -1.14
CSDE1-206ENST00000483030 GDAP2Q9NXN4 497 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 TRPM5Q9NZQ8 1165 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 TBC1D7Q9P0N9 293 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 SIX4Q9UIU6 781 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 MMP17Q9ULZ9 603 aa7.91□□□□□ -1.14
CSDE1-206ENST00000483030 PDCD11Q14690 1871 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM8BA6NDV4 472 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 SRRM3A6NNA2 597 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 SGK1O00141 431 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 SCAMP3O14828 347 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PPP1R37O75864 691 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 KLF8O95600 359 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 ABL1P00519 1130 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PDGFRBP09619 1106 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 TCF3P15923 654 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 BDNFP23560 247 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 LMO2P25791 158 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 GJB2P29033 226 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 TIE1P35590 1138 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 GRIK1P39086 918 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PTGER3P43115 390 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 MAGEA11P43364 429 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 MAPK8P45983 427 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PDE6CP51160 858 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 USP46P62068 366 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PSMC1P62191 440 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 MRPS21P82921 87 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 MESP2Q0VG99 397 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 LMAN2Q12907 356 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 USP49Q70CQ1 688 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 ARMCX6Q7L4S7 300 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 FILIP1Q7Z7B0 1213 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 SYT12Q8IV01 421 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 BRSK2Q8IWQ3 736 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 SYCP3Q8IZU3 236 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 TOP6BLQ8N6T0 577 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 IL17RCQ8NAC3 791 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 TXNDC5Q8NBS9 432 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 OLIG1Q8TAK6 271 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 NOC3LQ8WTT2 800 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 HVCN1Q96D96 273 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 EPSTI1Q96J88 318 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 ACCSQ96QU6 501 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 FNBP1Q96RU3 617 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PNKPQ96T60 521 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 STRA6Q9BX79 667 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 NUSAP1Q9BXS6 441 aaKnown RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 RNF38Q9H0F5 515 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 KDM4CQ9H3R0 1056 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PCIF1Q9H4Z3 704 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PDE11AQ9HCR9 933 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 ZDHHC4Q9NPG8 344 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 TMEM74BQ9NUR3 256 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 SMPD4Q9NXE4 827 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 PPP4R2Q9NY27 417 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 RBAKQ9NYW8 714 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 MAGEC2Q9UBF1 373 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 EVLQ9UI08 416 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-206ENST00000483030 ITGA11Q9UKX5 1188 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 EXOC7Q9UPT5 735 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 FRYQ5TBA9 3013 aa7.9□□□□□ -1.14
CSDE1-206ENST00000483030 ATRXP46100 2492 aa7.9□□□□□ -1.15
CSDE1-206ENST00000483030 ATG2BQ96BY7 2078 aa7.9□□□□□ -1.15
CSDE1-206ENST00000483030 GREB1Q4ZG55 1949 aa7.9□□□□□ -1.15
CSDE1-206ENST00000483030 SPAARA0A1B0GVQ0 90 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 ZNF840PA6NDX5 716 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 TNFRSF10BO14763 440 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 KAT7O95251 611 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 GCNT3O95395 438 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 BMP15O95972 392 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 LDHAP00338 332 aaKnown RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 APODP05090 189 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 CYP17A1P05093 508 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 ENGP17813 658 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 ANXA13P27216 316 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 P2RY2P41231 377 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SLC7A9P82251 487 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 CYP27A1Q02318 531 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 MYO1EQ12965 1108 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 DHCR24Q15392 516 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 L1TD1Q5T7N2 865 aaKnown RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 LARP1BQ659C4 914 aaKnown RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 LMBRD2Q68DH5 695 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 RHBDF2Q6PJF5 856 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 VSTM1Q6UX27 236 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms