RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 TMEM150AQ86TG1 271 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-209ENST00000482933 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-209ENST00000482933 TRMT2BQ96GJ1 504 aaKnown RBP13.67□□□□□ -0.22
COL21A1-209ENST00000482933 MYRFLQ96LU7 910 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 CEP295NLQ96MC4 621 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-209ENST00000482933 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 ZDHHC9Q9Y397 364 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 CACNA1IQ9P0X4 2223 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 DENND4CQ5VZ89 1909 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 SLC38A8A6NNN8 435 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 HCRTO43612 131 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 KINO60870 393 aaKnown RBP13.66□□□□□ -0.22
COL21A1-209ENST00000482933 PHACTR2O75167 634 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
COL21A1-209ENST00000482933 PRAMEF12O95522 483 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 PDGFRBP09619 1106 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 GNL1P36915 607 aaPredicted RBP13.66□□□□□ -0.22
COL21A1-209ENST00000482933 PSMC1P62191 440 aaKnown RBP13.66□□□□□ -0.22
COL21A1-209ENST00000482933 LRRC32Q14392 662 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 TXNDC8Q6A555 127 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 MON1AQ86VX9 555 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 SLC9A9Q8IVB4 645 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 SCN4BQ8IWT1 228 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 KIAA0895Q8NCT3 520 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 OR6B3Q8NGW1 331 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 TMEM174Q8WUU8 243 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 MYLPFQ96A32 169 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 ZFYVE19Q96K21 471 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 LRRC3BQ96PB8 259 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 FAM126AQ9BYI3 521 aaPredicted RBP13.66□□□□□ -0.22
COL21A1-209ENST00000482933 PRMT8Q9NR22 394 aaPredicted RBP13.66□□□□□ -0.22
COL21A1-209ENST00000482933 TDP1Q9NUW8 608 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 GTSE1Q9NYZ3 720 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 PCDHGA2Q9Y5H1 932 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 FANCMQ8IYD8 2048 aa13.66□□□□□ -0.22
COL21A1-209ENST00000482933 FAM237AA0A1B0GTK4 181 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 SPECC1L-ADORA2AF8WAN1 911 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 PDXKO00764 312 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 TRIM66O15016 1216 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 ATP2C2O75185 946 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CHRNB1P11230 501 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 ANXA13P27216 316 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CTHP32929 405 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 GRIK1P39086 918 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CCR3P51677 355 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CYP27A1Q02318 531 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 MTAPQ13126 283 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 BIRC3Q13489 604 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CC2D1AQ6P1N0 951 aaPredicted RBP13.65□□□□□ -0.22
COL21A1-209ENST00000482933 STKLD1Q8NE28 680 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 MYCBPAPQ8TBZ2 947 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 PARD3BQ8TEW8 1205 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CCDC34Q96HJ3 373 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 SPATA17Q96L03 361 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
COL21A1-209ENST00000482933 SMG9Q9H0W8 520 aaKnown RBP13.65□□□□□ -0.22
COL21A1-209ENST00000482933 CRTAC1Q9NQ79 661 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 DMAC2Q9NW81 257 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 ZSCAN32Q9NX65 697 aa13.65□□□□□ -0.22
COL21A1-209ENST00000482933 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
COL21A1-209ENST00000482933 A0A1W2PQ27 194 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 A0A1W2PQ64 194 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 A0A1W2PQD8 194 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 A8MXQ7 604 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 CALUO43852 315 aaPredicted RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 CLSTN1O94985 981 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 BDNFP23560 247 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 SOX9P48436 509 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 PDE6CP51160 858 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 NRLP54845 237 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 MYL6P60660 151 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 AMPD2Q01433 879 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 ITPRIPL2Q3MIP1 535 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 DGKKQ5KSL6 1271 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 PCED1BQ96HM7 432 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 KCTD10Q9H3F6 313 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 NXF1Q9UBU9 619 aaKnown RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 OBSL1O75147 1896 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 F5P12259 2224 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 ZFHX2Q9C0A1 2572 aaPredicted RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
COL21A1-209ENST00000482933 TADA3O75528 432 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 NR3C1P04150 777 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms