RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 SENP1Q9P0U3 644 aa18.91■□□□□ 0.62
SSR4-209ENST00000482902 DRG1Q9Y295 367 aaKnown RBP18.91■□□□□ 0.62
SSR4-209ENST00000482902 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 TTLL13PA6NNM8 815 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 HAUS5O94927 633 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 LSM8O95777 96 aaKnown RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 KRT15P19012 456 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 VCPP55072 806 aaKnown RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 FSTL1Q12841 308 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 MORF4L2Q15014 288 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 STXBP2Q15833 593 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 LRRC23Q53EV4 343 aaPredicted RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 ZBTB33Q86T24 672 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 BRSK2Q8IWQ3 736 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 TMEM35BQ8NCS4 154 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 C12orf42Q96LP6 360 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 NIFKQ9BYG3 293 aaKnown RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 OCEL1Q9H607 264 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 DDX43Q9NXZ2 648 aaKnown RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 ZNF212Q9UDV6 495 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 DCTN4Q9UJW0 460 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 WASF2Q9Y6W5 498 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 PARP14Q460N5 1801 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 ATP2A1O14983 1001 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 UBTFL6P0CB48 400 aaPredicted RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 MYL6P60660 151 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 PLCB3Q01970 1234 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 CNPY1Q3B7I2 92 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 LVRNQ6Q4G3 990 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 MICALL2Q8IY33 904 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 NR1H4Q96RI1 486 aaPredicted RBP18.9■□□□□ 0.62
SSR4-209ENST00000482902 MTMR12Q9C0I1 747 aa18.9■□□□□ 0.62
SSR4-209ENST00000482902 COL11A1P12107 1806 aaPredicted RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 GYG2O15488 501 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 ADCY3O60266 1144 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 IFNB1P01574 187 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 LYNP07948 512 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 NEK3P51956 506 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 OASLQ15646 514 aaKnown RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 TFDP3Q5H9I0 405 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 RNASEH2BQ5TBB1 312 aaKnown RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 PRAMEF18Q5VWM3 479 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 GPAT2Q6NUI2 795 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 WDR49Q8IV35 697 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 ZBED8Q8IZ13 594 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 TCHPQ9BT92 498 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 CISHQ9NSE2 258 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 A0A1W2PPM1 405 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 CFAP69A5D8W1 941 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 SGK1O00141 431 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 TROVE2P10155 538 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSR4-209ENST00000482902 ICAM3P32942 547 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 PIGHQ14442 188 aaPredicted RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 CATSPERGQ6ZRH7 1159 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 RINLQ6ZS11 566 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 STMN2Q93045 179 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 PRR11Q96HE9 360 aaPredicted RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 NDNQ99608 321 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 DDX50Q9BQ39 737 aaKnown RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 MMADHCQ9H3L0 296 aaPredicted RBP18.89■□□□□ 0.61
SSR4-209ENST00000482902 ZNF112Q9UJU3 913 aa18.89■□□□□ 0.61
SSR4-209ENST00000482902 TNS1Q9HBL0 1735 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 ALOX15BO15296 676 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 PYGBP11216 843 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 PTPN7P35236 360 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 CDKN2BP42772 138 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 AP3M2P53677 418 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 CNTN2Q02246 1040 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 CCDC142Q17RM4 750 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 PABPC1LQ4VXU2 614 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 CYP4A22Q5TCH4 519 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 SDCCAG8Q86SQ7 713 aaPredicted RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 ZNF276Q8N554 614 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 NKD2Q969F2 451 aaPredicted RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 MRRFQ96E11 262 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 NSL1Q96IY1 281 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 CAMKK2Q96RR4 588 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 SPATA16Q9BXB7 569 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 DDX56Q9NY93 547 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 HEY2Q9UBP5 337 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 SH3BP1Q9Y3L3 701 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 PHIPQ8WWQ0 1821 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 MYH9P35579 1960 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 LGR5O75473 907 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 ITGAVP06756 1048 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 OVGP1Q12889 678 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 PDIA2Q13087 525 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 CENPUQ71F23 418 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 ARHGAP18Q8N392 663 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 WDTC1Q8N5D0 677 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 MCUR1Q96AQ8 359 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 TUBB6Q9BUF5 446 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
SSR4-209ENST00000482902 PCDH9Q9HC56 1237 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 TAS2R1Q9NYW7 299 aa18.88■□□□□ 0.61
SSR4-209ENST00000482902 RLFQ13129 1914 aa18.87■□□□□ 0.61
SSR4-209ENST00000482902 IGKV6D-21A0A0A0MT36 114 aa18.87■□□□□ 0.61
SSR4-209ENST00000482902 C19orf81C9J6K1 198 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms