RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SYNGAP1Q96PV0 1343 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 RBBP6Q7Z6E9 1792 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 COL4A5P29400 1685 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 TRBV23-1A0A0A0MS06 115 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 A0A0U1RQJ8 604 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 VWA5AO00534 786 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 TLR2O60603 784 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 EXOC3O60645 756 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PLEKP08567 350 aaPredicted RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 H2AFZP0C0S5 128 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 SETSIPP0DME0 302 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PF4V1P10720 104 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FUT4P22083 530 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 CCND1P24385 295 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 YWHABP31946 246 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 GTF2H1P32780 548 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FMO5P49326 533 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 RARRES1P49788 294 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 RPS6P62753 249 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 GTF2BQ00403 316 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 GFPT1Q06210 699 aaPredicted RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 BFSP1Q12934 665 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 SMC1AQ14683 1233 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 COG2Q14746 738 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PGM5Q15124 567 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PCBP1Q15365 356 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNX13-208ENST00000482558 TOMM20Q15388 145 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 TERF2Q15554 542 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 ZYXQ15942 572 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 KIAA0753Q2KHM9 967 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 ZC3H12AQ5D1E8 599 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 DCAF17Q5H9S7 520 aaPredicted RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 FAM209AQ5JX71 171 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 NOL9Q5SY16 702 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 H2AFVQ71UI9 128 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 MAATS1Q7Z4T9 603 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FAM133AQ8N9E0 248 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 MCPH1Q8NEM0 835 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 BHLHE22Q8NFJ8 381 aaPredicted RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 ATRIPQ8WXE1 791 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FAM168AQ92567 244 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FIZ1Q96SL8 496 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 RMDN3Q96TC7 470 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PDCD2LQ9BRP1 358 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 CRACR2AQ9BSW2 395 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FGFBP2Q9BYJ0 223 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 RPAP3Q9H6T3 665 aaPredicted RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 IFT22Q9H7X7 185 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PXMP2Q9NR77 195 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FBXO28Q9NVF7 368 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 TMOD4Q9NZQ9 345 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 TRIM10Q9UDY6 481 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 FBXO40Q9UH90 709 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 CNOT7Q9UIV1 285 aaKnown RBP8.25□□□□□ -1.09
SNX13-208ENST00000482558 ADAMTS5Q9UNA0 930 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 PCDHA10Q9Y5I2 948 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 CSADQ9Y600 493 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 ZHX2Q9Y6X8 837 aa8.25□□□□□ -1.09
SNX13-208ENST00000482558 ZMYM2Q9UBW7 1377 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 SRCAPQ6ZRS2 3230 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 TRAV20A0A0B4J274 112 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 ABHD14A-ACY1A0A1B0GW23 586 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 A6NNZ2 444 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 RSPH10B2B2RC85 870 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 K7ENM7 598 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 NFIBO00712 420 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 TMPRSS2O15393 492 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 ZEB2O60315 1214 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 MOCS3O95396 460 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 RHOXF2BP0C7M4 288 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 RSPH10BP0C881 870 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 RBP3P10745 1247 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 NMT1P30419 496 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 GMPSP49915 693 aaPredicted RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 NCKAP1LP55160 1127 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 TNNC1P63316 161 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 MYL7Q01449 175 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 ADCY1Q08828 1119 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 DMP1Q13316 513 aaPredicted RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 RPS6KA1Q15418 735 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 TUBB8Q3ZCM7 444 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 CYP27C1Q4G0S4 372 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 FAM133BQ5BKY9 247 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 TAF3Q5VWG9 929 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 DPY19L2P1Q6NXN4 242 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 ALKBH5Q6P6C2 394 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 EMBQ6PCB8 327 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 LVRNQ6Q4G3 990 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 SRLQ86TD4 932 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 IFT20Q8IY31 132 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 TTC30BQ8N4P2 665 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 NKAPQ8N5F7 415 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 XXYLT1Q8NBI6 393 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 CHST13Q8NET6 341 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 SPATA4Q8NEY3 305 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 DNERQ8NFT8 737 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 FAM71BQ8TC56 605 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms