RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 HINFPQ9BQA5 517 aa21.16■□□□□ 0.98
MSH5-215ENST00000482280 ZNF518BQ9C0D4 1074 aa21.16■□□□□ 0.98
MSH5-215ENST00000482280 CHRDQ9H2X0 955 aa21.16■□□□□ 0.98
MSH5-215ENST00000482280 CCL26Q9Y258 94 aa21.16■□□□□ 0.98
MSH5-215ENST00000482280 NUP210Q8TEM1 1887 aaPredicted RBP21.15■□□□□ 0.98
MSH5-215ENST00000482280 PIEZO1Q92508 2521 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 RTN3O95197 1032 aaPredicted RBP21.15■□□□□ 0.98
MSH5-215ENST00000482280 VNN1O95497 513 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 GCLMP48507 274 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 TNK2Q07912 1038 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 MTF1Q14872 753 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 ZNF658Q5TYW1 1059 aaPredicted RBP21.15■□□□□ 0.98
MSH5-215ENST00000482280 SMYD4Q8IYR2 804 aaPredicted RBP21.15■□□□□ 0.98
MSH5-215ENST00000482280 CPA6Q8N4T0 437 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 ARL14EPQ8N8R7 260 aaPredicted RBP21.15■□□□□ 0.98
MSH5-215ENST00000482280 PDZD8Q8NEN9 1154 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 SMARCD1Q96GM5 515 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 B3GNT5Q9BYG0 378 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 EBF3Q9H4W6 596 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 DMAP1Q9NPF5 467 aaPredicted RBP21.15■□□□□ 0.98
MSH5-215ENST00000482280 PCDHGA2Q9Y5H1 932 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 COL4A3Q01955 1670 aa21.15■□□□□ 0.98
MSH5-215ENST00000482280 TICRRQ7Z2Z1 1910 aa21.14■□□□□ 0.98
MSH5-215ENST00000482280 CLDN5O00501 218 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 TADA3O75528 432 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 ASS1P00966 412 aaKnown RBP21.14■□□□□ 0.97
MSH5-215ENST00000482280 TRIM49P0CI25 452 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 TRIM49CP0CI26 452 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 GRSF1Q12849 480 aaKnown RBP eCLIP21.14■□□□□ 0.97
MSH5-215ENST00000482280 NR1H3Q13133 447 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 PON2Q15165 354 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 ACOT1Q86TX2 421 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 UNC93AQ86WB7 457 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 NUP93Q8N1F7 819 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 ATP2A3Q93084 1043 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 TIGD1Q96MW7 591 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 CYP2S1Q96SQ9 504 aa21.14■□□□□ 0.97
MSH5-215ENST00000482280 FAM126AQ9BYI3 521 aaPredicted RBP21.14■□□□□ 0.97
MSH5-215ENST00000482280 DUS2Q9NX74 493 aaKnown RBP21.14■□□□□ 0.97
MSH5-215ENST00000482280 C2orf78A6NCI8 922 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 CHRNB1P11230 501 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 YWHAQP27348 245 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 GTF2H1P32780 548 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 CXCL12P48061 93 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 NDST1P52848 882 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 KRT39Q6A163 491 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 FAM35AQ86V20 835 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 ADSSL1Q8N142 457 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 FBXO32Q969P5 355 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 FAM83CQ9BQN1 747 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 TTLL2Q9BWV7 592 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 CYP3A43Q9HB55 503 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 TMEM8AQ9HCN3 771 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.13■□□□□ 0.97
MSH5-215ENST00000482280 KRT82Q9NSB4 513 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 ZSCAN32Q9NX65 697 aa21.13■□□□□ 0.97
MSH5-215ENST00000482280 AP1G2O75843 785 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 USP46P62068 366 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 TAF10Q12962 218 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 FZD5Q13467 585 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 WDR44Q5JSH3 913 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 TCERG1LQ5VWI1 586 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 TRIM68Q6AZZ1 485 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 MAML2Q8IZL2 1156 aaPredicted RBP21.12■□□□□ 0.97
MSH5-215ENST00000482280 SYNPOQ8N3V7 929 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 SH3RF2Q8TEC5 729 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 OSCP1Q8WVF1 389 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 SECISBP2LQ93073 1101 aaKnown RBP21.12■□□□□ 0.97
MSH5-215ENST00000482280 ELMO3Q96BJ8 720 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 NACA2Q9H009 215 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 PRMT8Q9NR22 394 aaPredicted RBP21.12■□□□□ 0.97
MSH5-215ENST00000482280 ARHGAP26Q9UNA1 814 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 NME7Q9Y5B8 376 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 CACNA1HO95180 2353 aa21.12■□□□□ 0.97
MSH5-215ENST00000482280 ZNF840PA6NDX5 716 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 SHISA7A6NL88 538 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 PSMA7O14818 248 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 PPP1R2P41236 205 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 PRCPP42785 496 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 MXI1P50539 228 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 FKBP3Q00688 224 aaKnown RBP21.11■□□□□ 0.97
MSH5-215ENST00000482280 DCAF17Q5H9S7 520 aaPredicted RBP21.11■□□□□ 0.97
MSH5-215ENST00000482280 SPOPLQ6IQ16 392 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 TSSK4Q6SA08 328 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 MAMSTRQ6ZN01 415 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 DDX42Q86XP3 938 aaKnown RBP eCLIP21.11■□□□□ 0.97
MSH5-215ENST00000482280 SPEM1Q8N4L4 309 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 TTC39CQ8N584 583 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 TAS1R2Q8TE23 839 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 OVCA2Q8WZ82 227 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 SLC22A12Q96S37 553 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 NT5C1AQ9BXI3 368 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 NIF3L1Q9GZT8 377 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 SDCBP2Q9H190 292 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 PCDHA5Q9Y5H7 936 aa21.11■□□□□ 0.97
MSH5-215ENST00000482280 NFATC1O95644 943 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 FAM200BP0CF97 657 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 ARSAP15289 507 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 CD58P19256 250 aa21.1■□□□□ 0.97
MSH5-215ENST00000482280 ASPAP45381 313 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms