RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 LRRD1A4D1F6 860 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 PTGESO14684 152 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 MED7O43513 233 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 PSTPIP1O43586 416 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 ECEL1O95672 775 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 RARBP10826 455 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 CRYBB1P53674 252 aaPredicted RBP15.19■□□□□ 0.02
CHD3-211ENST00000481999 PPP1R7Q15435 360 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 SCUBE3Q8IX30 993 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 KBTBD7Q8WVZ9 684 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 ART4Q93070 314 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 SEMA4AQ9H3S1 761 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 LRRC19Q9H756 370 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 ST3GAL5Q9UNP4 418 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 H0YHG0 523 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 RGS16O15492 202 aaPredicted RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 ATP2C2O75185 946 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 RARGP13631 454 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 P4HA1P13674 534 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 ADORA2BP29275 332 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 MLH1P40692 756 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 ERMARDQ5T6L9 678 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 FAM183BPQ6ZVS7 135 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 KATNAL2Q8IYT4 538 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 CNPY4Q8N129 248 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 SLCO2A1Q92959 643 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 XPO6Q96QU8 1125 aaKnown RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 PAAF1Q9BRP4 392 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 KATNAL1Q9BW62 490 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 DCLK3Q9C098 648 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 MIS12Q9H081 205 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 STMN4Q9H169 189 aaPredicted RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 CYP3A43Q9HB55 503 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 AGTP01019 485 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 VDRP11473 427 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 ETS1P14921 441 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 TFE3P19532 575 aaPredicted RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 ACAT1P24752 427 aaKnown RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 MMP13P45452 471 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 GJA9P57773 515 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 CALCOCO2Q13137 446 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 CNGA2Q16280 664 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 KCNA10Q16322 511 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 FBXO47Q5MNV8 452 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 GKAP1Q5VSY0 366 aaPredicted RBP15.18■□□□□ 0.02
CHD3-211ENST00000481999 CCDC121Q6ZUS5 278 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 CACNA2D3Q8IZS8 1091 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 BEST2Q8NFU1 509 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 PLEKHA5Q9HAU0 1116 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 XPNPEP3Q9NQH7 507 aa15.18■□□□□ 0.02
CHD3-211ENST00000481999 TLDC2A0PJX2 215 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 SIGLEC16A6NMB1 481 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 A8MXQ7 604 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 ADAMTS4O75173 837 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 ZSCAN5DPP0CG00 497 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 ATP11AP98196 1134 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 SLC25A11Q02978 314 aaKnown RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 KYAT1Q16773 422 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 OR6B2Q6IFH4 312 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 CPLX4Q7Z7G2 160 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 CCDC25Q86WR0 208 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 RNF169Q8NCN4 708 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 GSTCDQ8NEC7 633 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 NDRG1Q92597 394 aaKnown RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 CHMP6Q96FZ7 201 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 SEC16BQ96JE7 1060 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 CABS1Q96KC9 395 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 CFAP57Q96MR6 1250 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 DNPEPQ9ULA0 475 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 Q9Y3F1 56 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 TIMM13Q9Y5L4 95 aaPredicted RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 RALGAPA2Q2PPJ7 1873 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 KPNA7A9QM74 516 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 PIRO00625 290 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 RIPK2O43353 540 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 NRLP54845 237 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 MRPS6P82932 125 aaKnown RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 QPCTQ16769 361 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 SUGP1Q8IWZ8 645 aaKnown RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 MDM1Q8TC05 714 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 PEBP4Q96S96 227 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 GAD1Q99259 594 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
CHD3-211ENST00000481999 MAGEB5Q9BZ81 275 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 MIOSQ9NXC5 875 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 CDH23Q9H251 3354 aa15.17■□□□□ 0.02
CHD3-211ENST00000481999 SEPT4O43236 478 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 HMGCRP04035 888 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 GHRP10912 638 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 FBXW10Q5XX13 1052 aa15.16■□□□□ 0.02
CHD3-211ENST00000481999 TRMT10CQ7L0Y3 403 aaKnown RBP15.16■□□□□ 0.02
CHD3-211ENST00000481999 TAB3Q8N5C8 712 aaPredicted RBP15.16■□□□□ 0.02
CHD3-211ENST00000481999 EXD1Q8NHP7 514 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms