RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PPP2R3CQ969Q6 453 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 ZNF566Q969W8 418 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 FAM136AQ96C01 138 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 ACTRT3Q9BYD9 372 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 MAGEB5Q9BZ81 275 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 DHX36Q9H2U1 1008 aaKnown RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 HEYLQ9NQ87 328 aaPredicted RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 DKK2Q9UBU2 259 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 PACSIN3Q9UKS6 424 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 NDRG4Q9ULP0 352 aaKnown RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 MRPS17Q9Y2R5 130 aaKnown RBP4.57□□□□□ -1.68
CBX3-207ENST00000481300 PCDHGB2Q9Y5G2 931 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 CDY1Q9Y6F8 540 aa4.57□□□□□ -1.68
CBX3-207ENST00000481300 ABHD14A-ACY1A0A1B0GW23 586 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 AQP7P3A6NL99 342 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 CLCA1A8K7I4 914 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 F5H423 210 aaPredicted RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 AREL1O15033 823 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 TPD52L2O43399 206 aaKnown RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 PIAS2O75928 621 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 LMNAP02545 664 aaKnown RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 MYL4P12829 197 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 PPP3CBP16298 524 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 BTF3P20290 206 aaKnown RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 PPM1AP35813 382 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 TECP42680 631 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 ITIH3Q06033 890 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 CHAF1AQ13111 956 aaPredicted RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 SF3B3Q15393 1217 aaKnown RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 SLC35G1Q2M3R5 365 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 VPS53Q5VIR6 699 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 ABHD17BQ5VST6 288 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 FBXO38Q6PIJ6 1188 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 GPR149Q86SP6 731 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 SYTL1Q8IYJ3 562 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 LCORLQ8N3X6 602 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 TOR1AIP2Q8NFQ8 470 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 MORC4Q8TE76 937 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 FUBP1Q96AE4 644 aaKnown RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 FAM83DQ9H4H8 585 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 SERHL2Q9H4I8 314 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 CXorf36Q9H7Y0 433 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 GJB4Q9NTQ9 266 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 RGS17Q9UGC6 210 aaPredicted RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 SERTAD3Q9UJW9 196 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 CDC23Q9UJX2 597 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 MAGED2Q9UNF1 606 aaPredicted RBP4.56□□□□□ -1.68
CBX3-207ENST00000481300 MAN2B2Q9Y2E5 1009 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 COL4A3Q01955 1670 aa4.56□□□□□ -1.68
CBX3-207ENST00000481300 RRP9O43818 475 aaKnown RBP4.55□□□□□ -1.68
CBX3-207ENST00000481300 SRGAP2O75044 1071 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 RHOBTB3O94955 611 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 A1BGP04217 495 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 SRGNP10124 158 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 KCNA3P22001 575 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 EEF1GP26641 437 aaKnown RBP4.55□□□□□ -1.68
CBX3-207ENST00000481300 PRKAR1BP31321 381 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 HSPA7P48741 367 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 PDE6CP51160 858 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 BLOC1S1P78537 153 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 STARD3Q14849 445 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 ZIK1Q3SY52 487 aaPredicted RBP4.55□□□□□ -1.68
CBX3-207ENST00000481300 PLAG1Q6DJT9 500 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 DPY19L2P1Q6NXN4 242 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 BEND2Q8NDZ0 799 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 ASB10Q8WXI3 467 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 LPIN2Q92539 896 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 ARPC5LQ9BPX5 153 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 WDR11Q9BZH6 1224 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 AMBRA1Q9C0C7 1298 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 CYP4F11Q9HBI6 524 aa4.55□□□□□ -1.68
CBX3-207ENST00000481300 TRMT13Q9NUP7 481 aaKnown RBP4.55□□□□□ -1.68
CBX3-207ENST00000481300 SCRIBQ14160 1630 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 PIPSLA2A3N6 862 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 HNRNPDLO14979 420 aaKnown RBP4.54□□□□□ -1.68
CBX3-207ENST00000481300 ADAMTS3O15072 1205 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 YY2O15391 372 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 PEX1O43933 1283 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 EGR2P11161 476 aaPredicted RBP4.54□□□□□ -1.68
CBX3-207ENST00000481300 COPAP53621 1224 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 NXPH1P58417 271 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 TNFAIP2Q03169 654 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 CCNIQ14094 377 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 NPY5RQ15761 445 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 MPEG1Q2M385 716 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 ZNF750Q32MQ0 723 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 CERCAMQ5T4B2 595 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 TEDDM1Q5T9Z0 273 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 DEPDC1Q5TB30 811 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 HECTD2Q5U5R9 776 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 FCRL6Q6DN72 434 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 MZT2AQ6P582 158 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 KRT28Q7Z3Y7 464 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 KCTD20Q7Z5Y7 419 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 LNX2Q8N448 690 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 FAM109AQ8N4B1 249 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 VGLL2Q8N8G2 317 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 DNAJB14Q8TBM8 379 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 MYCBPAPQ8TBZ2 947 aa4.54□□□□□ -1.68
CBX3-207ENST00000481300 OSCP1Q8WVF1 389 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms