RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCM2-214ENST00000481194 CAPN6Q9Y6Q1 641 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 COILP38432 576 aaPredicted RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 TUFMP49411 452 aaKnown RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 FAM171A1Q5VUB5 890 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 CCDC62Q6P9F0 684 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 JAMLQ86YT9 394 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 FZD8Q9H461 694 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 NCANO14594 1321 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 TREHO43280 583 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 ACSL3O95573 720 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 PMLP29590 882 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 RABGAP1LQ5R372 815 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 SPATA18Q8TC71 538 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 RBM12Q9NTZ6 932 aaKnown RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 UXTQ9UBK9 157 aaPredicted RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 IRF2BP1Q8IU81 584 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 SRRM1Q8IYB3 904 aaKnown RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 HSFY1Q96LI6 401 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 SMYD3Q9H7B4 428 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 ARHGAP42A6NI28 874 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 C3orf70A6NLC5 250 aaPredicted RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 GPR25O00155 361 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 SPAG6O75602 509 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 SLC6A3Q01959 620 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 PDIA2Q13087 525 aaKnown RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 TAF1BQ53T94 588 aaPredicted RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 CHSY1Q86X52 802 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 NECAB2Q7Z6G3 386 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 RXFP2Q8WXD0 754 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 EMID1Q96A84 441 aaPredicted RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 CABS1Q96KC9 395 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 FGFBP2Q9BYJ0 223 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 LACRTQ9GZZ8 138 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 TTC7AQ9ULT0 858 aaPredicted RBP20.12■□□□□ 0.81
CCM2-214ENST00000481194 USP18Q9UMW8 372 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 PTCH2Q9Y6C5 1203 aa20.12■□□□□ 0.81
CCM2-214ENST00000481194 ERBB2P04626 1255 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 FAM187BQ17R55 369 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 KLC3Q6P597 504 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 ZNF558Q96NG5 402 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 TSEN34Q9BSV6 310 aaKnown RBP20.11■□□□□ 0.81
CCM2-214ENST00000481194 HTATIP2Q9BUP3 242 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 KLHL14Q9P2G3 628 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 GJB1P08034 283 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 PTPN1P18031 435 aaKnown RBP20.11■□□□□ 0.81
CCM2-214ENST00000481194 DRP2Q13474 957 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 STAT4Q14765 748 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 HASPINQ8TF76 798 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 ZBTB9Q96C00 473 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.11■□□□□ 0.81
CCM2-214ENST00000481194 FDFT1P37268 417 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 CREBZFQ9NS37 354 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 SCG3Q8WXD2 468 aaKnown RBP20.11■□□□□ 0.81
CCM2-214ENST00000481194 LAMA4Q16363 1823 aa20.11■□□□□ 0.81
CCM2-214ENST00000481194 GOLGA8QA0A0J9YX86 632 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 GOLGA8OA6NCC3 632 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 GOLGA8NF8WBI6 632 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 C2CD2LO14523 706 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 CYP1A2P05177 515 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 ANKRD20A3Q5VUR7 823 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 PHF13Q86YI8 300 aaPredicted RBP20.1■□□□□ 0.81
CCM2-214ENST00000481194 OR5B17Q8NGF7 314 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 DPF3Q92784 378 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 TTI1O43156 1089 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 TRIM56Q9BRZ2 755 aaKnown RBP20.1■□□□□ 0.81
CCM2-214ENST00000481194 VIPAS39Q9H9C1 493 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 LAMB1P07942 1786 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 SMARCB1Q12824 385 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 LRIG3Q6UXM1 1119 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 UNC45BQ8IWX7 931 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 PPHLN1Q8NEY8 458 aaKnown RBP20.1■□□□□ 0.81
CCM2-214ENST00000481194 SLC2A14Q8TDB8 520 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 TFB1MQ8WVM0 346 aaKnown RBP20.1■□□□□ 0.81
CCM2-214ENST00000481194 ISCUQ9H1K1 167 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 TGM2P21980 687 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 TIGD7Q6NT04 549 aaPredicted RBP20.1■□□□□ 0.81
CCM2-214ENST00000481194 SPOCD1Q6ZMY3 1216 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 LRRC8DQ7L1W4 858 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 LRRC43Q8N309 656 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 ERP44Q9BS26 406 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 WRAP73Q9P2S5 460 aaPredicted RBP20.1■□□□□ 0.81
CCM2-214ENST00000481194 NR2E3Q9Y5X4 410 aa20.1■□□□□ 0.81
CCM2-214ENST00000481194 SAT1P21673 171 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 PPM1AP35813 382 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 SP2Q02086 613 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 TUSC3Q13454 348 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 C9orf57Q5W0N0 161 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 SLC24A5Q71RS6 500 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 HERC6Q8IVU3 1022 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 NCAM2O15394 837 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 C4BPAP04003 597 aaKnown RBP20.09■□□□□ 0.81
CCM2-214ENST00000481194 ATP1A2P50993 1020 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 YWHAZP63104 245 aaKnown RBP20.09■□□□□ 0.81
CCM2-214ENST00000481194 A0A1B0GUL6 1792 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 F5H5T6 163 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 CDH8P55286 799 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 SMTNL2Q2TAL5 461 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 GKAP1Q5VSY0 366 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms