RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 EFEMP2O95967 443 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 URODP06132 367 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 CNPP09543 421 aaKnown RBP7.14□□□□□ -1.27
LRCH3-216ENST00000481048 EPCAMP16422 314 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 KRT2P35908 639 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 ARL2P36404 184 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 CREMQ03060 361 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 DSC1Q08554 894 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 CTTNQ14247 550 aaKnown RBP7.14□□□□□ -1.27
LRCH3-216ENST00000481048 LONRF3Q496Y0 759 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 NCAPH2Q6IBW4 605 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 CCDC149Q6ZUS6 474 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 COLGALT2Q8IYK4 626 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 RNF168Q8IYW5 571 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-216ENST00000481048 STAMQ92783 540 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 DYDC2Q96IM9 177 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 RPS6KC1Q96S38 1066 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 EIF2AK1Q9BQI3 630 aaKnown RBP7.14□□□□□ -1.27
LRCH3-216ENST00000481048 HERC2P3Q9BVR0 1158 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 ASPNQ9BXN1 380 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 TTC12Q9H892 705 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-216ENST00000481048 RXFP1Q9HBX9 757 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 GCM1Q9NP62 436 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.14□□□□□ -1.27
LRCH3-216ENST00000481048 RGL1Q9NZL6 768 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 FNIP2Q9P278 1114 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 REV1Q9UBZ9 1251 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 IPPQ9Y573 584 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 KCTD3Q9Y597 815 aa7.14□□□□□ -1.27
LRCH3-216ENST00000481048 GVINP1Q7Z2Y8 2422 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 A0A1B0GUA9 196 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 FAM221AA4D161 298 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 ARL5CA6NH57 179 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CHURC1-FNTBB4DL54 471 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 INO80B-WBP1J3KQ70 363 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 NEMFO60524 1076 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 TSPAN1O60635 241 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CTDNEP1O95476 244 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 GLUD1P00367 558 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 POMCP01189 267 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 FDPSP14324 419 aaKnown RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 MUTP22033 750 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 SP100P23497 879 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 OR1G1P47890 313 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 GLUD2P49448 558 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 RARRES1P49788 294 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 ST13P50502 369 aaKnown RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 VCPP55072 806 aaKnown RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 DSG1Q02413 1049 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CYP4A11Q02928 519 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 ORC2Q13416 577 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 TDGQ13569 410 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 TRIM29Q14134 588 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CALCRLQ16602 461 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 FAM187BQ17R55 369 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 USP41Q3LFD5 358 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 ZNF385BQ569K4 471 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 TCERG1LQ5VWI1 586 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 SLC27A1Q6PCB7 646 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 TMC5Q6UXY8 1006 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 C12orf76Q8N812 135 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 MCPH1Q8NEM0 835 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 AUTS2Q8WXX7 1259 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 ATOH1Q92858 354 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CCDC74BQ96LY2 380 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 MTMR9Q96QG7 549 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 GAD1Q99259 594 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 RTP3Q9BQQ7 232 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 VN1R3Q9BXE9 311 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 TRIM6Q9C030 488 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 WDR6Q9NNW5 1121 aaKnown RBP7.13□□□□□ -1.27
LRCH3-216ENST00000481048 XPNPEP1Q9NQW7 623 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CHST7Q9NS84 486 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 VWA8A3KMH1 1905 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 ADAMTS20P59510 1910 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 MIA3Q5JRA6 1907 aa7.13□□□□□ -1.27
LRCH3-216ENST00000481048 CCDC195A0A1B0GUA6 201 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 ANKRD33BA6NCL7 494 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 TEX28O15482 410 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 B4GALT3O60512 393 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 F13A1P00488 732 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 PF4P02776 101 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 WEE2P0C1S8 567 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 ARF4P18085 180 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-216ENST00000481048 GLRA2P23416 452 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 AK2P54819 239 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 LMNB2Q03252 620 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 MBTD1Q05BQ5 628 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 GRIK3Q13003 919 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 PSMD2Q13200 908 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 EARS2Q5JPH6 523 aaKnown RBP7.12□□□□□ -1.27
LRCH3-216ENST00000481048 RTL10Q7L3V2 364 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 PHACTR4Q8IZ21 702 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 GSTCDQ8NEC7 633 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms