RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 CPB1P15086 417 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 SCNN1AP37088 669 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 ACADSBP45954 432 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 SLC8A3P57103 927 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 ERVFC1P60507 584 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 GPC5P78333 572 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 MLLT1Q03111 559 aaPredicted RBP17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 PLEKHA7Q6IQ23 1121 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 RNF19BQ6ZMZ0 732 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 PIGZQ86VD9 579 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 SCML4Q8N228 414 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 MRPL43Q8N983 215 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 CTNNBL1Q8WYA6 563 aaPredicted RBP17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 ALG13Q9NP73 1137 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 TLR9Q9NR96 1032 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 ADAM22Q9P0K1 906 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 WDR35Q9P2L0 1181 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 STRIP2Q9ULQ0 834 aa17.78■□□□□ 0.44
SCAMP3-207ENST00000480219 A0A0U1RQJ8 604 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 TMCO5BA8MYB1 307 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 GRM6O15303 877 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 TEX28O15482 410 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 CNPP09543 421 aaKnown RBP17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 ATF2P15336 505 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 BDNFP23560 247 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 DNAJB2P25686 324 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 SNX16P57768 344 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 KIF5AQ12840 1032 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 ZNF268Q14587 947 aaPredicted RBP17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 PPP2R2DQ66LE6 453 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 LILRA6Q6PI73 481 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 TMC7Q7Z402 723 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 KIAA1328Q86T90 577 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 DNAAF5Q86Y56 855 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 ZDHHC17Q8IUH5 632 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 ATRIPQ8WXE1 791 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 RFFLQ8WZ73 363 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 C18orf8Q96DM3 657 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 MCRS1Q96EZ8 462 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 TCF25Q9BQ70 676 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 THAP2Q9H0W7 228 aa17.77■□□□□ 0.44
SCAMP3-207ENST00000480219 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.43
SCAMP3-207ENST00000480219 C2orf71A6NGG8 1288 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 USP27XA6NNY8 438 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 C2CD2LO14523 706 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 TNFRSF10BO14763 440 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 TRIM66O15016 1216 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 KRT86O43790 486 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 CXCL14O95715 111 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 ERBB2P04626 1255 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 HAPLN1P10915 354 aaPredicted RBP17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 RPL17P18621 184 aaKnown RBP17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 CYP2F1P24903 491 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 MAP3K7CLP57077 242 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 GPM6BQ13491 265 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 MMS22LQ6ZRQ5 1243 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 XYLT1Q86Y38 959 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 RHOT2Q8IXI1 618 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 RNF10Q8N5U6 811 aaKnown RBP17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 ATAD1Q8NBU5 361 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 C3orf20Q8ND61 904 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 ARHGEF26Q96DR7 871 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 KLHL5Q96PQ7 755 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 C11orf70Q9BRQ4 267 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 RHOBTB2Q9BYZ6 727 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 CRISPLD1Q9H336 500 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 SLC28A3Q9HAS3 691 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 ABI2Q9NYB9 513 aaPredicted RBP17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 IL37Q9NZH6 218 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 UVRAGQ9P2Y5 699 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 USP3Q9Y6I4 520 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 TRANK1O15050 2925 aa17.76■□□□□ 0.43
SCAMP3-207ENST00000480219 E5RJQ4 531 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 RRM1P23921 792 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 TUFMP49411 452 aaKnown RBP17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 RTL10Q7L3V2 364 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 ARCQ7LC44 396 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 TCEAL8Q8IYN2 117 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 ZNF653Q96CK0 615 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 KCNK16Q96T55 309 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 EMILIN2Q9BXX0 1053 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 TJP2Q9UDY2 1190 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 CNOT8Q9UFF9 292 aaKnown RBP17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 SALL4Q9UJQ4 1053 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 TFR2Q9UP52 801 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 SCINQ9Y6U3 715 aa17.75■□□□□ 0.43
SCAMP3-207ENST00000480219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.74■□□□□ 0.43
SCAMP3-207ENST00000480219 FAM92AA1XBS5 289 aa17.74■□□□□ 0.43
SCAMP3-207ENST00000480219 F8VP50 259 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms