RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 LEFTY2O00292 366 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 SCAMP3O14828 347 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 AP5Z1O43299 807 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 SH3BP5O60239 455 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 FTH1P19P0C7X4 201 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 KIR2DL1P43626 348 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 RPL6Q02878 288 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 GNL2Q13823 731 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 BYSLQ13895 437 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 HNRNPDQ14103 355 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 TRIP6Q15654 476 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 SV2CQ496J9 727 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 ARSHQ5FYA8 562 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 EOGTQ5NDL2 527 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 CCNI2Q6ZMN8 369 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 FILIP1Q7Z7B0 1213 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 ADAMTS14Q8WXS8 1223 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 LRIG1Q96JA1 1093 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 ASB7Q9H672 318 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 DNAAF2Q9NVR5 837 aaKnown RBP18.62■□□□□ 0.57
HMGN1-212ENST00000479586 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
HMGN1-212ENST00000479586 ASXL3Q9C0F0 2248 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 MYO18AQ92614 2054 aaKnown RBP18.61■□□□□ 0.57
HMGN1-212ENST00000479586 MYMKA6NI61 221 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 TISP43B9A030 160 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 ARHGAP33O14559 1287 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 KAT7O95251 611 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 PLA2G4BP0C869 781 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 KDSRQ06136 332 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 HSF5Q4G112 596 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-212ENST00000479586 INTS6LQ5JSJ4 861 aaKnown RBP18.61■□□□□ 0.57
HMGN1-212ENST00000479586 HYIQ5T013 277 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 SCN4BQ8IWT1 228 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 FSIP1Q8NA03 581 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 PNKPQ96T60 521 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 DDX43Q9NXZ2 648 aaKnown RBP18.61■□□□□ 0.57
HMGN1-212ENST00000479586 KCND2Q9NZV8 630 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 L1RE1Q9UN81 338 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 KALRNO60229 2985 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 MYOFQ9NZM1 2061 aa18.61■□□□□ 0.57
HMGN1-212ENST00000479586 ANKRD63C9JTQ0 380 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 HCRTO43612 131 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 APODP05090 189 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 ANAPC15P60006 121 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 ATP2C1P98194 919 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-212ENST00000479586 ZNF33AQ06730 810 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 DHCR24Q15392 516 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 DTHD1Q6ZMT9 781 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 FBXO18Q8NFZ0 1043 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 ZNF560Q96MR9 790 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 REEP2Q9BRK0 252 aa18.6■□□□□ 0.57
HMGN1-212ENST00000479586 EIF4E1BA6NMX2 242 aaKnown RBP18.59■□□□□ 0.57
HMGN1-212ENST00000479586 PRPHP41219 470 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 RESTQ13127 1097 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 RABEPKQ7Z6M1 372 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 OSTM1Q86WC4 334 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 SPATA2LQ8IUW3 424 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-212ENST00000479586 ADGRG2Q8IZP9 1017 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 ARHGEF4Q9NR80 690 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 PCDHB9Q9Y5E1 797 aa18.59■□□□□ 0.57
HMGN1-212ENST00000479586 MAST4O15021 2626 aa18.58■□□□□ 0.57
HMGN1-212ENST00000479586 LAD1O00515 517 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 GJB3O75712 270 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 GABRG2P18507 467 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 EIF2DP41214 584 aaKnown RBP18.58■□□□□ 0.56
HMGN1-212ENST00000479586 CFAP221Q4G0U5 840 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 SCARA3Q6AZY7 606 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 SLC36A4Q6YBV0 504 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 SLC41A1Q8IVJ1 513 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 NAXDQ8IW45 347 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 MYCT1Q8N699 235 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 ADAM32Q8TC27 787 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 SMPD4Q9NXE4 827 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 CALCOCO1Q9P1Z2 691 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 ODF2LQ9ULJ1 636 aa18.58■□□□□ 0.56
HMGN1-212ENST00000479586 URB1O60287 2271 aaKnown RBP18.58■□□□□ 0.56
HMGN1-212ENST00000479586 PTPRBP23467 1997 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 A0A0A0MRY4 1105 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 SYPP08247 313 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
HMGN1-212ENST00000479586 GRIA2P42262 883 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 PDE6CP51160 858 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 WNT7BP56706 349 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 USP46P62068 366 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 MYL7Q01449 175 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 SLC14A1Q13336 389 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 TMEM119Q4V9L6 283 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 RHBDF2Q6PJF5 856 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 CRELD2Q6UXH1 353 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-212ENST00000479586 CCDC83Q8IWF9 413 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 PHTF2Q8N3S3 785 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 HSPA12BQ96MM6 686 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 RNF38Q9H0F5 515 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 IKZF4Q9H2S9 585 aa18.57■□□□□ 0.56
HMGN1-212ENST00000479586 SCUBE2Q9NQ36 999 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms