RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TFDP2Q14188 446 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 DPYSL3Q14195 570 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 FAM47CQ5HY64 1035 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 KCNT1Q5JUK3 1230 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 UNC45BQ8IWX7 931 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 MAB21L3Q8N8X9 362 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 NSMCE1Q8WV22 266 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 NFKBIZQ9BYH8 718 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 MIS12Q9H081 205 aa25.76■■□□□ 1.71
SYNGAP1-206ENST00000479510 IQANK1A0A1B0GTG1 560 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 BANF1O75531 89 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 PRAMEF18Q5VWM3 479 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 ZNF276Q8N554 614 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 SH3TC2Q8TF17 1288 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 UTP4Q969X6 686 aaKnown RBP25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 TUBB6Q9BUF5 446 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 BTBD7Q9P203 1132 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 SIX4Q9UIU6 781 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 USP18Q9UMW8 372 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 CILPO75339 1184 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 TMEM63AO94886 807 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 RBP3P10745 1247 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 P4HA1P13674 534 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 GAD2Q05329 585 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 BBS9Q3SYG4 887 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 CHSY1Q86X52 802 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 CCDC125Q86Z20 511 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 SPATC1LQ9H0A9 340 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 BATF3Q9NR55 127 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 LNPEPQ9UIQ6 1025 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 FZD1Q9UP38 647 aa25.75■■□□□ 1.71
SYNGAP1-206ENST00000479510 E7ENQ6 273 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 FAM155BO75949 473 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 ZNF143P52747 638 aaPredicted RBP25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 ROR1Q01973 937 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 NOMO1Q15155 1222 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 CELF3Q5SZQ8 465 aaKnown RBP25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 NLRP9Q7RTR0 991 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 LRRC71Q8N4P6 559 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 TTC39CQ8N584 583 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 TMEM176AQ96HP8 235 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 CDT1Q9H211 546 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 TJP2Q9UDY2 1190 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 LRRC37A2A6NM11 1700 aa25.74■■□□□ 1.71
SYNGAP1-206ENST00000479510 A8MUI8 341 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 CHADO15335 359 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 IL1BP01584 269 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 VDRP11473 427 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 POU5F1BQ06416 359 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 CRYMQ14894 314 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 EFTUD2Q15029 972 aaKnown RBP eCLIP25.73■■□□□ 1.712e-7■■■■□ 22.5
SYNGAP1-206ENST00000479510 FAM71DQ8N9W8 422 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 SPATA18Q8TC71 538 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 TCP10LQ8TDR4 215 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 MRRFQ96E11 262 aaKnown RBP25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 CNPY3Q9BT09 278 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 TLE6Q9H808 572 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 BRCA1P38398 1863 aaKnown RBP25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 NOP56O00567 594 aaKnown RBP25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 MICAL2O94851 1124 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 MT-ND3P03897 115 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 KRT19P08727 400 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 CD48P09326 243 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 ADRA1DP25100 572 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 TNFAIP2Q03169 654 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 LY6KQ17RY6 165 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 EMC1Q8N766 993 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 C1orf127Q8N9H9 656 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 CFAP61Q8NHU2 1237 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 SDCBP2Q9H190 292 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 PNPLA8Q9NP80 782 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 ANK1P16157 1881 aa25.73■■□□□ 1.71
SYNGAP1-206ENST00000479510 INO80B-WBP1J3KQ70 363 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 TGDSO95455 350 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 DHRS4L1P0CG22 281 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 T-ENOLP0DO92 83 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 RAP1GAPP47736 663 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 MBTD1Q05BQ5 628 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 KYAT1Q16773 422 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 FAM187BQ17R55 369 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 WASHC2DQ5SRD0 308 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 EEF1DP3Q658K8 133 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 SLC44A1Q8WWI5 657 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 SLC7A6OSQ96CW6 309 aaPredicted RBP25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 INO80BQ9C086 356 aaPredicted RBP25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 MANSC1Q9H8J5 431 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 PRMT7Q9NVM4 692 aaPredicted RBP25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 PCSK1NQ9UHG2 260 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 ZFP69BQ9UJL9 534 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 KIAA1257Q9ULG3 409 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 TCRBV7S3A2A0A539 114 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 HGSO14964 777 aaPredicted RBP25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 FGFR1P11362 822 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 TARSP26639 723 aaKnown RBP25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 GPD2P43304 727 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 BASP1P80723 227 aaKnown RBP25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 SLC18A2Q05940 514 aa25.72■■□□□ 1.71
SYNGAP1-206ENST00000479510 KCNJ11Q14654 390 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms