RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NOP14P78316 857 aaKnown RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 FAM189BP81408 668 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 GCNT1Q02742 428 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SOX4Q06945 474 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 RAPGEF1Q13905 1077 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 ZNF699Q32M78 642 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SPOPLQ6IQ16 392 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 FAM117BQ6P1L5 589 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SLC24A5Q71RS6 500 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SND1Q7KZF4 910 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP48-208ENST00000479177 RRAGAQ7L523 313 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 CACNA2D4Q7Z3S7 1137 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 RTN4RL1Q86UN2 441 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 CCDC112Q8NEF3 446 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 ZNF397Q8NF99 534 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 DBF4BQ8NFT6 615 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 BEST2Q8NFU1 509 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 OR8K1Q8NGG5 319 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SYN2Q92777 582 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 KAT5Q92993 513 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 C18orf25Q96B23 403 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 ELMO3Q96BJ8 720 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 TRIM43Q96BQ3 446 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 PGBD4Q96DM1 585 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 KREMEN1Q96MU8 473 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 ZNF830Q96NB3 372 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 ASB16Q96NS5 453 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 PPP1R10Q96QC0 940 aaKnown RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 STK33Q9BYT3 514 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 GPR88Q9GZN0 384 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 XYLT2Q9H1B5 865 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 RSAD1Q9HA92 442 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SRA1Q9HD15 236 aaKnown RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 NLRC4Q9NPP4 1024 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 RNF19AQ9NV58 838 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 DPP3Q9NY33 737 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 DNAJC12Q9UKB3 198 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 UBQLN1Q9UMX0 589 aaKnown RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 PLAGL2Q9UPG8 496 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 COL4A6Q14031 1691 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 ANO9A1A5B4 782 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 ARL5CA6NH57 179 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 PPEF2O14830 753 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 XPOTO43592 962 aaKnown RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 CST3P01034 146 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 PNMA6AP0CW24 399 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 ESRRAP11474 423 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 CYP3A5P20815 502 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 LRPAP1P30533 357 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 ASPAP45381 313 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 MAPK8P45983 427 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 SCNN1GP51170 649 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 CDK17Q00537 523 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 TRPC3Q13507 836 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 CUL2Q13617 745 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 IKBKEQ14164 716 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 GRM2Q14416 872 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 DRAP1Q14919 205 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 NAB2Q15742 525 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 ASIC2Q16515 512 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 ZNF423Q2M1K9 1284 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 SFMBT2Q5VUG0 894 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 CNKSR3Q6P9H4 555 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 WDR59Q6PJI9 974 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 ACAD11Q709F0 780 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 DEFB128Q7Z7B8 93 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 PPM1KQ8N3J5 372 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 UBR7Q8N806 425 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 RNF169Q8NCN4 708 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 SHC3Q92529 594 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 TAF4BQ92750 862 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 TRIM44Q96DX7 344 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 FAM81BQ96LP2 452 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 SPAG5Q96R06 1193 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 RPS6KC1Q96S38 1066 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 GAD1Q99259 594 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 BAG1Q99933 345 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 IMPG2Q9BZV3 1241 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 ABCB6Q9NP58 842 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 UBE2TQ9NPD8 197 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 UBN1Q9NPG3 1134 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 PRDM5Q9NQX1 630 aaPredicted RBP7.12□□□□□ -1.27
USP48-208ENST00000479177 SLC38A7Q9NVC3 462 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 TMEM161AQ9NX61 479 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 AIPL1Q9NZN9 384 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 NUB1Q9Y5A7 615 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 TSC2P49815 1807 aa7.12□□□□□ -1.27
USP48-208ENST00000479177 FNDC1Q4ZHG4 1894 aaPredicted RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 ENPP3O14638 875 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ARHGAP6O43182 974 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 PAX4O43316 350 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 NRDCO43847 1150 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 OFD1O75665 1012 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 EOMESO95936 686 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 KRT19P08727 400 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 SKILP12757 684 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 RAG1P15918 1043 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms