RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 PSMG2Q969U7 264 aa16.12■□□□□ 0.17
COL16A1-211ENST00000479100 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
COL16A1-211ENST00000479100 GANQ9H2C0 597 aa16.12■□□□□ 0.17
COL16A1-211ENST00000479100 WDR6Q9NNW5 1121 aaKnown RBP16.12■□□□□ 0.17
COL16A1-211ENST00000479100 DMAP1Q9NPF5 467 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-211ENST00000479100 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
COL16A1-211ENST00000479100 IFNKQ9P0W0 207 aa16.12■□□□□ 0.17
COL16A1-211ENST00000479100 KIAA1257Q9ULG3 409 aa16.12■□□□□ 0.17
COL16A1-211ENST00000479100 FOXN3O00409 490 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-211ENST00000479100 NOL4O94818 638 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 PAPLNO95428 1278 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 PNMA6AP0CW24 399 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-211ENST00000479100 CSH1P0DML2 217 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 CSH2P0DML3 217 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 RFX1P22670 979 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 BRD2P25440 801 aaKnown RBP16.11■□□□□ 0.17
COL16A1-211ENST00000479100 ZNF132P52740 706 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 IFRD2Q12894 506 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-211ENST00000479100 NR1I3Q14994 352 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 ARHGAP17Q68EM7 881 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 C8orf48Q96LL4 319 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 KCNK16Q96T55 309 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 SMOQ99835 787 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 ZNF334Q9HCZ1 680 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-211ENST00000479100 TMEM30AQ9NV96 361 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 CNTN6Q9UQ52 1028 aa16.11■□□□□ 0.17
COL16A1-211ENST00000479100 MRPS23Q9Y3D9 190 aaKnown RBP16.11■□□□□ 0.17
COL16A1-211ENST00000479100 ZNF197O14709 1029 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 EPHB6O15197 1021 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 CYP26A1O43174 497 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 THAP12O43422 761 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 GBP2P32456 591 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-211ENST00000479100 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 GPIHBP1Q8IV16 184 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 ITFG1Q8TB96 612 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 ING5Q8WYH8 240 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 TCEAL4Q96EI5 215 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 SPATA17Q96L03 361 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 SPAG5Q96R06 1193 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 NAA15Q9BXJ9 866 aaKnown RBP16.1■□□□□ 0.17
COL16A1-211ENST00000479100 DUSP16Q9BY84 665 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 STK33Q9BYT3 514 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 RBSNQ9H1K0 784 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 KCNH6Q9H252 994 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 ACP6Q9NPH0 428 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 TSPAN16Q9UKR8 245 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 ZNF318Q5VUA4 2279 aa16.1■□□□□ 0.17
COL16A1-211ENST00000479100 TMEM221A6NGB7 291 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 M0R296 226 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 BEST1O76090 585 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 TPM3P06753 285 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 GJA1P17302 382 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 NPR3P17342 541 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 GABRR2P28476 465 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 GNA15P30679 374 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 SLC8A3P57103 927 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 SLC5A9Q2M3M2 681 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 CLEC20AQ6ZU45 233 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 DENND5BQ6ZUT9 1274 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 GAS2L3Q86XJ1 694 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 ZMIZ2Q8NF64 920 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 UBA3Q8TBC4 463 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 ASIC4Q96FT7 647 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 GCNAQ96QF7 691 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 ATXN3LQ9H3M9 355 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 C2orf16Q68DN1 1984 aa16.09■□□□□ 0.17
COL16A1-211ENST00000479100 A0A1W2PRU2 124 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 F8VZ95 297 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 M0QYV0 167 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 O00370 1275 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 CBFA2T2O43439 604 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 FGF19O95750 216 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 HMGA1P17096 107 aaKnown RBP16.08■□□□□ 0.16
COL16A1-211ENST00000479100 CEBPBP17676 345 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 CCR2P41597 374 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 BCAT1P54687 386 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 PTK2Q05397 1052 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 SIGLEC14Q08ET2 396 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 STILQ15468 1287 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 CNGA2Q16280 664 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 LCLAT1Q6UWP7 414 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 TTC30AQ86WT1 665 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 TMC8Q8IU68 726 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 FAM71AQ8IYT1 594 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 NUP93Q8N1F7 819 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 TDRD5Q8NAT2 981 aaKnown RBP16.08■□□□□ 0.16
COL16A1-211ENST00000479100 ANKRD52Q8NB46 1076 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 LEMD2Q8NC56 503 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 ACSF2Q96CM8 615 aaPredicted RBP16.08■□□□□ 0.16
COL16A1-211ENST00000479100 ZSWIM1Q9BR11 485 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 LRRC3Q9BY71 257 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 XPO4Q9C0E2 1151 aaKnown RBP16.08■□□□□ 0.16
COL16A1-211ENST00000479100 GPR88Q9GZN0 384 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 CSNK1G1Q9HCP0 422 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 DAAM1Q9Y4D1 1078 aa16.08■□□□□ 0.16
COL16A1-211ENST00000479100 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms