RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 IFNLR1Q8IU57 520 aaPredicted RBP22.14■■□□□ 1.14
SDF4-206ENST00000478938 PQLC1Q8N2U9 271 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 GRIN3AQ8TCU5 1115 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 TGFBRAP1Q8WUH2 860 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 FOXP3Q9BZS1 431 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 ATRNL1Q5VV63 1379 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 CYP1A2P05177 515 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 NELFEP18615 380 aaKnown RBP22.14■■□□□ 1.13
SDF4-206ENST00000478938 NUP107P57740 925 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 DENND5BQ6ZUT9 1274 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 LARGE2Q8N3Y3 721 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 TSPAN14Q8NG11 270 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 CCDC127Q96BQ5 260 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 SERAC1Q96JX3 654 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 EBF1Q9UH73 591 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 CCPG1Q9ULG6 757 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 LRP5O75197 1615 aa22.14■■□□□ 1.13
SDF4-206ENST00000478938 ALOX15BO15296 676 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 FDX1P10109 184 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 ZNF23P17027 643 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 PHBP35232 272 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 PEX6Q13608 980 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 PGM2L1Q6PCE3 622 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 RTKN2Q8IZC4 609 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 LAMB1P07942 1786 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 DENND3A2RUS2 1198 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 TBC1D12O60347 775 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 RCVRNP35243 200 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 YWHAGP61981 247 aaKnown RBP eCLIP22.13■■□□□ 1.13
SDF4-206ENST00000478938 GAD2Q05329 585 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 CCDC142Q17RM4 750 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 ADGRD1Q6QNK2 874 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 KBTBD6Q86V97 674 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 ZFPM1Q8IX07 1006 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 KAT5Q92993 513 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 PLEKHA8Q96JA3 519 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 CGREF1Q99674 301 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 KLC2Q9H0B6 622 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 ATAD3AQ9NVI7 634 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 SERPINA10Q9UK55 444 aa22.13■■□□□ 1.13
SDF4-206ENST00000478938 MT-ND3P03897 115 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 CYP2C9P11712 490 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 ADCY7P51828 1080 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 BST1Q10588 318 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 GPS1Q13098 491 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 KLF1Q13351 362 aaPredicted RBP22.12■■□□□ 1.13
SDF4-206ENST00000478938 NANOGP8Q6NSW7 305 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 SLC44A5Q8NCS7 719 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 CNTN3Q9P232 1028 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 I3L4J1 428 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 TSPY3P0CV98 308 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 TSPY8P0CW00 308 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 ZNF12P17014 697 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 GLRA2P23416 452 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 CYP2J2P51589 502 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 DCLRE1AQ6PJP8 1040 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 DDHD1Q8NEL9 900 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 DCAKDQ8WVC6 231 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 BHMT2Q9H2M3 363 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 ANAPC7Q9UJX3 599 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 UBR2Q8IWV8 1755 aa22.12■■□□□ 1.13
SDF4-206ENST00000478938 SFI1A8K8P3 1242 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 DMPKQ09013 629 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 BORCS5Q969J3 196 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 ALKBH8Q96BT7 664 aaKnown RBP22.11■■□□□ 1.13
SDF4-206ENST00000478938 XPNPEP1Q9NQW7 623 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 HERC5Q9UII4 1024 aaKnown RBP22.11■■□□□ 1.13
SDF4-206ENST00000478938 PACSIN3Q9UKS6 424 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 EMSYQ7Z589 1322 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 IL1BP01584 269 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 ARSEP51690 589 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 TMPRSS15P98073 1019 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 APOPT1Q96IL0 206 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 NSMCE3Q96MG7 304 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 MAN1C1Q9NR34 630 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 GTF3C4Q9UKN8 822 aa22.11■■□□□ 1.13
SDF4-206ENST00000478938 SERPINA6P08185 405 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 BMP3P12645 472 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 ALDH3B2P48448 385 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 C21orf59P57076 290 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 RAB15P59190 212 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 ARPC4P59998 168 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 TBCCQ15814 346 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 NIPAL1Q6NVV3 410 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 DZIP1Q86YF9 867 aaKnown RBP22.1■■□□□ 1.13
SDF4-206ENST00000478938 DEFB107AQ8IZN7 70 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 EPS8L1Q8TE68 723 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 HAUS8Q9BT25 410 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 PPCSQ9HAB8 311 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 MKNK2Q9HBH9 465 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 IGSF9Q9P2J2 1179 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 PADI4Q9UM07 663 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 MAST2Q6P0Q8 1798 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 CNOT3O75175 753 aaKnown RBP22.1■■□□□ 1.13
SDF4-206ENST00000478938 DGKIO75912 1065 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 AOC1P19801 751 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 MAPK4P31152 587 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 GJC1P36383 396 aa22.1■■□□□ 1.13
SDF4-206ENST00000478938 CREB5Q02930 508 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms