RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 INO80DQ53TQ3 878 aaPredicted RBP3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 ARHGAP40Q5TG30 622 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 CACHD1Q5VU97 1274 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 ANO1Q5XXA6 986 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 SFRP4Q6FHJ7 346 aaPredicted RBP3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 RGS7BPQ6MZT1 257 aaPredicted RBP3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 PGBD2Q6P3X8 592 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 CCDC174Q6PII3 467 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 FBXO38Q6PIJ6 1188 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 USP17L6PQ6QN14 398 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 CRTC1Q6UUV9 634 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 KIAA0408Q6ZU52 694 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 COLGALT2Q8IYK4 626 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 CCDC150Q8NCX0 1101 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 SMCR8Q8TEV9 937 aaPredicted RBP3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 CACTINQ8WUQ7 758 aaKnown RBP3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 MUL1Q969V5 352 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 SNX27Q96L92 541 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 NELL2Q99435 816 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 FAM83DQ9H4H8 585 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 NECTIN3Q9NQS3 549 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 INTS13Q9NVM9 706 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 SSX2IPQ9Y2D8 614 aa3.98□□□□□ -1.77
SUPT20H-215ENST00000478911 NPIPB8E9PQR5 432 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 PIP5K1CO60331 668 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 LPXNO60711 386 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 SRGAP2O75044 1071 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 SKAP2O75563 359 aaPredicted RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 RASAL1O95294 804 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 PEX11BO96011 259 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 CHKAP35790 457 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 HALP42357 657 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 GALNT1Q10472 559 aaPredicted RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 TP53BP2Q13625 1128 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 BLMHQ13867 455 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 E2F2Q14209 437 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 KCNAB1Q14722 419 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 ZRSR2Q15696 482 aaKnown RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 ELF2Q15723 593 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 PDCD2Q16342 344 aaPredicted RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 PTCHD3Q3KNS1 767 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 ZACNQ401N2 412 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 ICE2Q659A1 982 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 GGT6Q6P531 493 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 USP49Q70CQ1 688 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 RHOUQ7L0Q8 258 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 CCDC28AQ8IWP9 274 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 NKAPQ8N5F7 415 aaKnown RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 DNAJB14Q8TBM8 379 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 IPO4Q8TEX9 1081 aaKnown RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 PPP2R3CQ969Q6 453 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 LENG9Q96B70 501 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 FAM136AQ96C01 138 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 CHFRQ96EP1 664 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 PLEKHG4BQ96PX9 1271 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 HERPUD2Q9BSE4 406 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 TRIM5Q9C035 493 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 AMBRA1Q9C0C7 1298 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 IGSF9Q9P2J2 1179 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 SERTAD3Q9UJW9 196 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 FZD1Q9UP38 647 aa3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 MORC2Q9Y6X9 1032 aaPredicted RBP3.97□□□□□ -1.77
SUPT20H-215ENST00000478911 WDR33Q9C0J8 1336 aaKnown RBP3.96□□□□□ -1.77
SUPT20H-215ENST00000478911 CENPVL1A0A0U1RR11 272 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 AQP12BA6NM10 295 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 LGALS16A8MUM7 142 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 SYT5O00445 386 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 NPC1O15118 1278 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 CD3EAPO15446 510 aaKnown RBP3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 RGS10O43665 173 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 CSTBP04080 98 aaKnown RBP3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 IDEP14735 1019 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 PPP3CBP16298 524 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 EGR1P18146 543 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 MST1P26927 711 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 ATICP31939 592 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 PRKAG1P54619 331 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 GUCY1B3Q02153 619 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 FSTL1Q12841 308 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 GRM1Q13255 1194 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 SPARCL1Q14515 664 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 MAPKAPK3Q16644 382 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 PFKFB4Q16877 469 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 SLC5A9Q2M3M2 681 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 TIGD2Q4W5G0 525 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 CCDC38Q502W7 563 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 CERCAMQ5T4B2 595 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 MANEALQ5VSG8 457 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 RAP1GAP2Q684P5 730 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 MRNIPQ6NTE8 343 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 TLDC1Q6P9B6 456 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 GPR149Q86SP6 731 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 KRT73Q86Y46 540 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 ARHGEF19Q8IW93 802 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 SLC15A3Q8IY34 581 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 SPARTQ8N0X7 666 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 ANKRD42Q8N9B4 389 aa3.96□□□□□ -1.78
SUPT20H-215ENST00000478911 SLC30A5Q8TAD4 765 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms