RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 SMOC1Q9H4F8 434 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 CRTAC1Q9NQ79 661 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 ARHGAP26Q9UNA1 814 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 MTMR6Q9Y217 621 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 MORC2Q9Y6X9 1032 aaPredicted RBP14.15□□□□□ -0.14
VCL-205ENST00000478896 SDK1Q7Z5N4 2213 aa14.15□□□□□ -0.14
VCL-205ENST00000478896 STX6O43752 255 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 RHOBTB1O94844 696 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 TCF3P15923 654 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 PFKLP17858 780 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 NASPP49321 788 aaPredicted RBP14.14□□□□□ -0.15
VCL-205ENST00000478896 SEC13P55735 322 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 CREB5Q02930 508 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
VCL-205ENST00000478896 PLK5Q496M5 336 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 TRAPPC11Q7Z392 1133 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 INTS4Q96HW7 963 aaKnown RBP14.14□□□□□ -0.15
VCL-205ENST00000478896 ZC3H10Q96K80 434 aaKnown RBP14.14□□□□□ -0.15
VCL-205ENST00000478896 CEP295NLQ96MC4 621 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 TRIM9Q9C026 710 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 CUEDC2Q9H467 287 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 VPS45Q9NRW7 570 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 RXFP3Q9NSD7 469 aa14.14□□□□□ -0.15
VCL-205ENST00000478896 F8VP50 259 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 LEFTY2O00292 366 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 DCLK1O15075 740 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 SPTLC2O15270 562 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 GNL1P36915 607 aaPredicted RBP14.13□□□□□ -0.15
VCL-205ENST00000478896 CYP2J2P51589 502 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 USP46P62068 366 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 TRPC3Q13507 836 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 ST3GAL2Q16842 350 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 PLA2G2CQ5R387 149 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 FAM26FQ5R3K3 315 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 STPG1Q5TH74 334 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 RNF43Q68DV7 783 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 TTC30AQ86WT1 665 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 NELFCDQ8IXH7 590 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 MYCBPAPQ8TBZ2 947 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 EZH1Q92800 747 aaPredicted RBP14.13□□□□□ -0.15
VCL-205ENST00000478896 CCDC127Q96BQ5 260 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 CGRRF1Q99675 332 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 MRPL45Q9BRJ2 306 aaKnown RBP14.13□□□□□ -0.15
VCL-205ENST00000478896 TPSD1Q9BZJ3 242 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 DUSP15Q9H1R2 295 aaPredicted RBP14.13□□□□□ -0.15
VCL-205ENST00000478896 LINC00597Q9H2U6 94 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 KBTBD4Q9NVX7 518 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 NCOR2Q9Y618 2525 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 UBE4BO95155 1302 aa14.13□□□□□ -0.15
VCL-205ENST00000478896 CLIC2O15247 247 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 PPP6R2O75170 966 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 PPP3CCP48454 512 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 E2F4Q16254 413 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 WDR72Q3MJ13 1102 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 C2orf27AQ580R0 203 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 TDRD10Q5VZ19 366 aaKnown RBP14.12□□□□□ -0.15
VCL-205ENST00000478896 TCEAL6Q6IPX3 200 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 ANO7Q6IWH7 933 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 LIMS2Q7Z4I7 341 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 FILIP1Q7Z7B0 1213 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 IQUBQ8NA54 791 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 TCEAL3Q969E4 200 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 ZNF396Q96N95 335 aaPredicted RBP14.12□□□□□ -0.15
VCL-205ENST00000478896 SLITRK1Q96PX8 696 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 EDEM2Q9BV94 578 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 ELOVL4Q9GZR5 314 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 AGPAT3Q9NRZ7 376 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 SMPD4Q9NXE4 827 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 EBF1Q9UH73 591 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 CPQQ9Y646 472 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 SPTBN2O15020 2390 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 NUP205Q92621 2012 aa14.12□□□□□ -0.15
VCL-205ENST00000478896 THADAQ6YHU6 1953 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 ZNF840PA6NDX5 716 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 A8MXQ7 604 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 K7ELQ4 463 aaPredicted RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 SLC9A3R1O14745 358 aaPredicted RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 SCAMP3O14828 347 aaKnown RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 PHACTR2O75167 634 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 TACC1O75410 805 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 KRT37O76014 449 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 CAVIN2O95810 425 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 CST3P01034 146 aaPredicted RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 CYP17A1P05093 508 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 MBL2P11226 248 aaPredicted RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 OPRD1P41143 372 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 NOP14P78316 857 aaKnown RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 ZXDBP98169 803 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 CYP24A1Q07973 514 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 TAF10Q12962 218 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 PSMD6Q15008 389 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 USP39Q53GS9 565 aaKnown RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 C11orf74Q86VG3 221 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 XXYLT1Q8NBI6 393 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 ZNF507Q8TCN5 953 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 C8orf48Q96LL4 319 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 TTLL2Q9BWV7 592 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 DPEP3Q9H4B8 488 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms