RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 ATP2A3Q93084 1043 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 CCDC47Q96A33 483 aaKnown RBP11.57□□□□□ -0.56
VANGL1-206ENST00000478369 MRPL45Q9BRJ2 306 aaKnown RBP11.57□□□□□ -0.56
VANGL1-206ENST00000478369 ELOVL4Q9GZR5 314 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 KCTD10Q9H3F6 313 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 EBF3Q9H4W6 596 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 TRPC7Q9HCX4 862 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
VANGL1-206ENST00000478369 TRPM5Q9NZQ8 1165 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 GMEB2Q9UKD1 530 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 ARHGAP26Q9UNA1 814 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 DMXL1Q9Y485 3027 aa11.57□□□□□ -0.56
VANGL1-206ENST00000478369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 CCDC163A0A0D9SF12 145 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 LRRIQ3A6PVS8 624 aaPredicted RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 A8MXQ7 604 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 K7ESF4 209 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 IKBKBO14920 756 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 MAPK13O15264 365 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 LRP3O75074 770 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 C4BPAP04003 597 aaKnown RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 RPN1P04843 607 aaKnown RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 P4HA1P13674 534 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 HDCP19113 662 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 NDUFA8P51970 172 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 BIRC3Q13489 604 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 PUM1Q14671 1186 aaKnown RBP eCLIP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 NFIL3Q16649 462 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 CCDC142Q17RM4 750 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 ZNF699Q32M78 642 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 ZNF667Q5HYK9 610 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 TDRD10Q5VZ19 366 aaKnown RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 LAIR1Q6GTX8 287 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 Q6ZS52 159 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 DCLK2Q8N568 766 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 B3GALNT2Q8NCR0 500 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 CCDC26Q8TAB7 109 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 OVCA2Q8WZ82 227 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 TAF4BQ92750 862 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 TNIP3Q96KP6 325 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 CYP2S1Q96SQ9 504 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 ECT2Q9H8V3 914 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 TRAF3IP3Q9Y228 551 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 ATP8B3O60423 1300 aa11.56□□□□□ -0.56
VANGL1-206ENST00000478369 ZNF638Q14966 1978 aaKnown RBP11.56□□□□□ -0.56
VANGL1-206ENST00000478369 GPR179Q6PRD1 2367 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 GREB1Q4ZG55 1949 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 C2orf78A6NCI8 922 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 ZNF840PA6NDX5 716 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 OTOL1A6NHN0 477 aaPredicted RBP11.55□□□□□ -0.56
VANGL1-206ENST00000478369 PRR5-ARHGAP8B1AHC4 643 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 CHURC1-FNTBB4DL54 471 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 F8VP50 259 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 CALUO43852 315 aaPredicted RBP11.55□□□□□ -0.56
VANGL1-206ENST00000478369 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 RTN3O95197 1032 aaPredicted RBP11.55□□□□□ -0.56
VANGL1-206ENST00000478369 NR3C1P04150 777 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 ARSAP15289 507 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 IFNAR2P48551 515 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 SLC7A9P82251 487 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 ARHGAP8P85298 464 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 ENPEPQ07075 957 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 NCOA4Q13772 614 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 SGSM1Q2NKQ1 1148 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 TRIM68Q6AZZ1 485 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 FSTL4Q6MZW2 842 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 WDR5BQ86VZ2 330 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 ARL14EPQ8N8R7 260 aaPredicted RBP11.55□□□□□ -0.56
VANGL1-206ENST00000478369 PDZD8Q8NEN9 1154 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 RIN3Q8TB24 985 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 PLEKHO2Q8TD55 490 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 SH3RF2Q8TEC5 729 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 CCDC34Q96HJ3 373 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 SLITRK1Q96PX8 696 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 SLC22A12Q96S37 553 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 P2RY13Q9BPV8 354 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 GDPD2Q9HCC8 539 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 COMMD8Q9NX08 183 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 DLL3Q9NYJ7 618 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 FRMD4BQ9Y2L6 1034 aa11.55□□□□□ -0.56
VANGL1-206ENST00000478369 PTPRDP23468 1912 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 FOXD2O60548 495 aaPredicted RBP11.54□□□□□ -0.56
VANGL1-206ENST00000478369 NFATC1O95644 943 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 OLFM2O95897 454 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 RETP07949 1114 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 TRIM21P19474 475 aaKnown RBP11.54□□□□□ -0.56
VANGL1-206ENST00000478369 GJA4P35212 333 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 FNTBP49356 437 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 CASP4P49662 377 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 GALK1P51570 392 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 USP46P62068 366 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 LMNB2Q03252 620 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 SIM2Q14190 667 aaPredicted RBP11.54□□□□□ -0.56
VANGL1-206ENST00000478369 EML3Q32P44 896 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 ZACNQ401N2 412 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 UNC93AQ86WB7 457 aa11.54□□□□□ -0.56
VANGL1-206ENST00000478369 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms