RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	TIE1	P35590	1138 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	EIF2D	P41214	584 aa	Known RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	PRPH	P41219	470 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	SLC6A11	P48066	632 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	ACOT2	P49753	483 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	TOB1	P50616	345 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	PDE6C	P51160	858 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	ST3GAL1	Q11201	340 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	TRIP6	Q15654	476 aa	Known RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	ARSH	Q5FYA8	562 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	RABEPK	Q7Z6M1	372 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	SFTPA1	Q8IWL2	248 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	ADGRG2	Q8IZP9	1017 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	PGBD3	Q8N328	593 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	KIAA1958	Q8N8K9	716 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	SPATA18	Q8TC71	538 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	HMGB4	Q8WW32	186 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	PNKP	Q96T60	521 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	DNAAF2	Q9NVR5	837 aa	Known RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	GTF3C4	Q9UKN8	822 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	ODF2L	Q9ULJ1	636 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	PCDH15	Q96QU1	1955 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	HELZ	P42694	1942 aa	Known RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	GOLGA4	Q13439	2230 aa	Known RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	TCRBV21S2A2	A0A5A6	115 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	EIF4E1B	A6NMX2	242 aa	Known RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279		K7ENM7	598 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	LEFTY2	O00292	366 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	ADAM23	O75077	832 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	APOD	P05090	189 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	SYP	P08247	313 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	PFKL	P17858	780 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	PNPLA4	P41247	253 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	TNFRSF4	P43489	277 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	KIR2DL1	P43626	348 aa	Predicted RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	ZXDB	P98169	803 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	MYL7	Q01449	175 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	POU5F1	Q01860	360 aa	Known RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	RPL6	Q02878	288 aa	Known RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	MESP2	Q0VG99	397 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	SLC14A1	Q13336	389 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	DHCR24	Q15392	516 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	CFAP221	Q4G0U5	840 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	INTS6L	Q5JSJ4	861 aa	Known RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	EMC10	Q5UCC4	262 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	ADAL	Q6DHV7	355 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	SLC36A4	Q6YBV0	504 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	FILIP1	Q7Z7B0	1213 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	NT5DC4	Q86YG4	428 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	SCN4B	Q8IWT1	228 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	PDCL2	Q8N4E4	241 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	ZNF560	Q96MR9	790 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	BBC3	Q96PG8	261 aa	Predicted RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	PLIN2	Q99541	437 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	PKMYT1	Q99640	499 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	DDX43	Q9NXZ2	648 aa	Known RBP	11.36	□□□□□ -0.59
APTX-222	ENST00000478279	PCDHB9	Q9Y5E1	797 aa		11.36	□□□□□ -0.59
APTX-222	ENST00000478279	ANKRD63	C9JTQ0	380 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	SLC9A3R1	O14745	358 aa	Predicted RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	SH3BP5	O60239	455 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	HUS1	O60921	280 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	FTH1P19	P0C7X4	201 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	ACAT1	P24752	427 aa	Known RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	GRIA2	P42262	883 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	ATP2C1	P98194	919 aa	Predicted RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	ZNF33A	Q06730	810 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	TMEM86A	Q8N2M4	240 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	DEFB119	Q8N690	84 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	MYCT1	Q8N699	235 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	PNPLA1	Q8N8W4	532 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	OR2I1P	Q8NGU4	316 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	CDK5RAP3	Q96JB5	506 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	CAMK1G	Q96NX5	476 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	REEP2	Q9BRK0	252 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	LLPH	Q9BRT6	129 aa	Known RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	PARVG	Q9HBI0	331 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	SCUBE2	Q9NQ36	999 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	ARHGEF4	Q9NR80	690 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	TRPM5	Q9NZQ8	1165 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	AGO2	Q9UKV8	859 aa	Known RBP	11.35	□□□□□ -0.59
APTX-222	ENST00000478279	L1RE1	Q9UN81	338 aa		11.35	□□□□□ -0.59
APTX-222	ENST00000478279	KNL1	Q8NG31	2342 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279		A0A1W2PQD8	194 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.34	□□□□□ -0.59
APTX-222	ENST00000478279	TRAK2	O60296	914 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	GJB3	O75712	270 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	FAM13A	O94988	1023 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	ZIC2	O95409	532 aa	Predicted RBP	11.34	□□□□□ -0.59
APTX-222	ENST00000478279	ABCD1	P33897	745 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	MAGEA11	P43364	429 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	NEK4	P51957	841 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	ZNF131	P52739	623 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	SLC7A9	P82251	487 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	GTF2B	Q00403	316 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	REST	Q13127	1097 aa		11.34	□□□□□ -0.59
APTX-222	ENST00000478279	TMEM119	Q4V9L6	283 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms