RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 BSNDQ8WZ55 320 aa15.24■□□□□ 0.03
HDAC6-220ENST00000477528 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
HDAC6-220ENST00000477528 GPATCH2LQ9NWQ4 482 aa15.24■□□□□ 0.03
HDAC6-220ENST00000477528 C3orf70A6NLC5 250 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 ADM5C9JUS6 153 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 HMGCRP04035 888 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 POLBP06746 335 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 ZNF286BP0CG31 522 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 GHRP10912 638 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 C1orf146Q5VVC0 180 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 NDUFAF2Q8N183 169 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 KIF2BQ8N4N8 673 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 LRGUKQ96M69 825 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 TBCBQ99426 244 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 MAF1Q9H063 256 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 KLK14Q9P0G3 267 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 COG5Q9UP83 839 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 DFFAO00273 331 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 MTSS1O43312 755 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 MOCS2O96007 188 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 KCNA2P16389 499 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 CYP2B6P20813 491 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 PALB2Q86YC2 1186 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 GSDMBQ8TAX9 411 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 KLRG1Q96E93 195 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 ACO2Q99798 780 aaKnown RBP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 MAGEB5Q9BZ81 275 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 SCOCQ9UIL1 159 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 KIAA1841Q6NSI8 718 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 GRID1Q9ULK0 1009 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 TNFSF13BQ9Y275 285 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 NKRFO15226 690 aaKnown RBP eCLIP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 CTSHP09668 335 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 EPHX2P34913 555 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 SH2D4BQ5SQS7 431 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 LONP2Q86WA8 852 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 SLITRK1Q96PX8 696 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 ARHGAP28Q9P2N2 729 aa15.23■□□□□ 0.03
HDAC6-220ENST00000477528 ABT1Q9ULW3 272 aaKnown RBP15.23■□□□□ 0.03
HDAC6-220ENST00000477528 CFLARO15519 480 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 GRIK4Q16099 956 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 PLPPR4Q7Z2D5 763 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 KCNV2Q8TDN2 545 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 E2F7Q96AV8 911 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 ATXN7L3BQ96GX2 97 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 ERVK-5Q9HDB9 667 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 WRAP73Q9P2S5 460 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 SIGLEC16A6NMB1 481 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 APOEP02649 317 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 TGM2P21980 687 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 RAD23BP54727 409 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 TTC8Q8TAM2 541 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 FAM111AQ96PZ2 611 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 DRG1Q9Y295 367 aaKnown RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 A0A0B4J269 797 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 STRNO43815 780 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 CCND1P24385 295 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 SPRP35270 261 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 AUHQ13825 339 aaKnown RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 ANKRD20A8PQ5CZ79 823 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 DCLK2Q8N568 766 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 AP4E1Q9UPM8 1137 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 C17orf102A2RUQ5 167 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 MAP3K6O95382 1288 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 ASS1P00966 412 aaKnown RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 PGM1P36871 562 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 HADHBP55084 474 aaKnown RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 BST2Q10589 180 aaKnown RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 ARHGEF6Q15052 776 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 SPATA2LQ8IUW3 424 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-220ENST00000477528 DAW1Q8N136 415 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 CCNYL1Q8N7R7 359 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
HDAC6-220ENST00000477528 M0QYT0 321 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 FANCGO15287 622 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 S100BP04271 92 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-220ENST00000477528 MIPP30301 263 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 TNFSF9P41273 254 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 MROH9Q5TGP6 573 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 SLC26A11Q86WA9 606 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 ZDHHC17Q8IUH5 632 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 CCNJLQ8IV13 435 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 RYBPQ8N488 228 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-220ENST00000477528 APOC4-APOC2K7ER74 178 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 APOC2P02655 101 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 FBXO47Q5MNV8 452 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 DENND1BQ6P3S1 775 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 ZNF410Q86VK4 478 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 ZC3H3Q8IXZ2 948 aaKnown RBP15.21■□□□□ 0.03
HDAC6-220ENST00000477528 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 AGPSO00116 658 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 LIASO43766 372 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 SLC4A1P02730 911 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 JAG1P78504 1218 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 UGP2Q16851 508 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 ERMARDQ5T6L9 678 aa15.21■□□□□ 0.03
HDAC6-220ENST00000477528 ZNF526Q8TF50 670 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms