RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MTO1Q9Y2Z2 717 aaKnown RBP19.26■□□□□ 0.67
VARS2-209ENST00000477288 CKMP06732 381 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 GPC1P35052 558 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 TSGA10IPQ3SY00 556 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 LINC00523Q86TU6 105 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 CENPTQ96BT3 561 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 MANSC1Q9H8J5 431 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 ANKEF1Q9NU02 776 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 RBP3P10745 1247 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 GALNTL6Q49A17 601 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 WLSQ5T9L3 541 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 GJB7Q6PEY0 223 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 PLEKHH3Q7Z736 793 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 RNF112Q9ULX5 631 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 DLC1Q96QB1 1528 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 E2F7Q96AV8 911 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 TPST1O60507 370 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 TBX20Q9UMR3 447 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 EIF3LQ9Y262 564 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 IPPQ9Y573 584 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 ALBP02768 609 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 TRIM71Q2Q1W2 868 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 USP39Q53GS9 565 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 DENND5BQ6ZUT9 1274 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 HASPINQ8TF76 798 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.25■□□□□ 0.67
VARS2-209ENST00000477288 DEPDC7Q96QD5 511 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 KRT84Q9NSB2 600 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 CAMSAP1Q5T5Y3 1602 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 USP1O94782 785 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 EGFRP00533 1210 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 URODP06132 367 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 GPRASP2Q96D09 838 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 LINC00854A0A1B0GVQ3 168 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 GUCA1AP43080 201 aaPredicted RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 KLK7P49862 253 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 SNRPFP62306 86 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 KYNUQ16719 465 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 FAXCQ5TGI0 409 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 LRIG3Q6UXM1 1119 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 EFL1Q7Z2Z2 1120 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 CDY2AQ9Y6F7 541 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 CDY1Q9Y6F8 540 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 SKAP2O75563 359 aaPredicted RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 NME5P56597 212 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 CAMK2GQ13555 558 aaPredicted RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 PGS1Q32NB8 556 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 XRRA1Q6P2D8 792 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 JAMLQ86YT9 394 aa19.25■□□□□ 0.67
VARS2-209ENST00000477288 GFM2Q969S9 779 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 CELF4Q9BZC1 486 aaKnown RBP19.25■□□□□ 0.67
VARS2-209ENST00000477288 GEMP55040 296 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 EDRF1Q3B7T1 1238 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 GJC2Q5T442 439 aaPredicted RBP19.24■□□□□ 0.67
VARS2-209ENST00000477288 ZNF677Q86XU0 584 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 PHACTR4Q8IZ21 702 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 CCDC33Q8N5R6 958 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 CCT8L2Q96SF2 557 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 RPS6KB2Q9UBS0 482 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 SSU72P8A0A1W2PR75 194 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 TMEM120BA0PK00 339 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 RGS5O15539 181 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 SPAG6O75602 509 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 FYNP06241 537 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 WEE1P30291 646 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 CTXN3Q4LDR2 81 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 KAT2BQ92831 832 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 SH3GL2Q99962 352 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 GOLGA8TH3BQL2 631 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
VARS2-209ENST00000477288 CPB2Q96IY4 423 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 RBM12Q9NTZ6 932 aaKnown RBP19.24■□□□□ 0.67
VARS2-209ENST00000477288 APPL1Q9UKG1 709 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 VPS9D1Q9Y2B5 631 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 A0A1B0GTH6 734 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 VTNP04004 478 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 VCLP18206 1134 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 KCNJ1P48048 391 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 NUDT2P50583 147 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 CACHD1Q5VU97 1274 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 FBXW10Q5XX13 1052 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 XPO6Q96QU8 1125 aaKnown RBP19.24■□□□□ 0.67
VARS2-209ENST00000477288 SH3GL3Q99963 347 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 KRCC1Q9NPI7 259 aaPredicted RBP19.24■□□□□ 0.67
VARS2-209ENST00000477288 CYB561D2O14569 222 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 ACADMP11310 421 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 DAB2IPQ5VWQ8 1189 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 DDI1Q8WTU0 396 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 FAM136AQ96C01 138 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 SGSM3Q96HU1 749 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 SEC16BQ96JE7 1060 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 NFKBIZQ9BYH8 718 aa19.24■□□□□ 0.67
VARS2-209ENST00000477288 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
VARS2-209ENST00000477288 RAD51CO43502 376 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 RPA1P27694 616 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 PLCL1Q15111 1095 aa19.23■□□□□ 0.67
VARS2-209ENST00000477288 FAM83EQ2M2I3 478 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms