RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 USP37Q86T82 979 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 SLC15A3Q8IY34 581 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 FAM46DQ8NEK8 389 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 ATL2Q8NHH9 583 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 ZNF398Q8TD17 642 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 R3HDM4Q96D70 268 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 ZNF479Q96JC4 524 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 POLR3GLQ9BT43 218 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 ANP32EQ9BTT0 268 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 GLOD4Q9HC38 313 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 PRSS29PA6NIE9 313 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 CNOT3O75175 753 aaKnown RBP3.33□□□□□ -1.88
XRN1-211ENST00000477237 TJP3O95049 919 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 MT-CO1P00395 513 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 GNAI2P04899 355 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 NGFRP08138 427 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 RARBP10826 455 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 TNFRSF8P28908 595 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 THBS4P35443 961 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 PIK3CGP48736 1102 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 ID2Q02363 134 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 INPP5JQ15735 1006 aaPredicted RBP3.33□□□□□ -1.88
XRN1-211ENST00000477237 TBC1D25Q3MII6 688 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 ARHGAP40Q5TG30 622 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 DEF8Q6ZN54 512 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 TTC7BQ86TV6 843 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 NR2C2APQ86WQ0 139 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 PCSK9Q8NBP7 692 aaKnown RBP3.33□□□□□ -1.88
XRN1-211ENST00000477237 GLG1Q92896 1179 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 SLC46A1Q96NT5 459 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 LENG8Q96PV6 779 aaPredicted RBP3.33□□□□□ -1.88
XRN1-211ENST00000477237 GPR35Q9HC97 309 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 GJB4Q9NTQ9 266 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 SIDT1Q9NXL6 827 aaKnown RBP3.33□□□□□ -1.88
XRN1-211ENST00000477237 PI4KBQ9UBF8 816 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 MCM8Q9UJA3 840 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 PCDHA3Q9Y5H8 950 aa3.33□□□□□ -1.88
XRN1-211ENST00000477237 A1L4Q6 167 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 KLHL33A6NCF5 533 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 NT5C1B-RDH14C9J2C7 533 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 TMEM232C9JQI7 657 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 GRID2O43424 1007 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 IARSP41252 1262 aaKnown RBP3.32□□□□□ -1.88
XRN1-211ENST00000477237 MASP1P48740 699 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 FAM187BQ17R55 369 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 RNF219Q5W0B1 726 aaPredicted RBP3.32□□□□□ -1.88
XRN1-211ENST00000477237 SFRP4Q6FHJ7 346 aaPredicted RBP3.32□□□□□ -1.88
XRN1-211ENST00000477237 TMED8Q6PL24 325 aaPredicted RBP3.32□□□□□ -1.88
XRN1-211ENST00000477237 CNTD1Q8N815 330 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 ABHD11Q8NFV4 315 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 OSR1Q8TAX0 266 aaPredicted RBP3.32□□□□□ -1.88
XRN1-211ENST00000477237 MAP4K1Q92918 833 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 COA7Q96BR5 231 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 ZFYVE19Q96K21 471 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 CIPCQ9C0C6 399 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 RLIMQ9NVW2 624 aa3.32□□□□□ -1.88
XRN1-211ENST00000477237 TRIP12Q14669 1992 aaPredicted RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 TRIM75PA6NK02 468 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 FPR3P25089 353 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 TPTEP56180 551 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 ZNF324BQ6AW86 544 aaPredicted RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 CAPRIN2Q6IMN6 1127 aaKnown RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 ANKRD13BQ86YJ7 626 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 CERS3Q8IU89 383 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 CPA6Q8N4T0 437 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 NSUN6Q8TEA1 469 aaKnown RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 ATG4AQ8WYN0 398 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 NAP1L5Q96NT1 182 aaPredicted RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 SLITRK1Q96PX8 696 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 DPCDQ9BVM2 203 aaPredicted RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 MRPL44Q9H9J2 332 aaKnown RBP3.31□□□□□ -1.88
XRN1-211ENST00000477237 SSX2IPQ9Y2D8 614 aa3.31□□□□□ -1.88
XRN1-211ENST00000477237 TNFRSF13BO14836 293 aaPredicted RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 PLGP00747 810 aaPredicted RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 PRDX5P30044 214 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 PXNP49023 591 aaPredicted RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 LILRA4P59901 499 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 IRX6P78412 446 aaPredicted RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 TCF15Q12870 199 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 KIF22Q14807 665 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 RNASE12Q5GAN4 147 aaKnown RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 FAM160B1Q5W0V3 765 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 RGS7BPQ6MZT1 257 aaPredicted RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 PPP1R32Q7Z5V6 425 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 C3orf20Q8ND61 904 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 C1orf162Q8NEQ5 155 aaPredicted RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 ADAMTS18Q8TE60 1221 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 IGFBPL1Q8WX77 278 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 DDX17Q92841 729 aaKnown RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 FAXDC2Q96IV6 333 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 MEIS3Q99687 375 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 TMEM204Q9BSN7 226 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 ASIC5Q9NY37 505 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 TFCP2L1Q9NZI6 479 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 SERPINB13Q9UIV8 391 aa3.3□□□□□ -1.88
XRN1-211ENST00000477237 CFAP20Q9Y6A4 193 aaKnown RBP3.3□□□□□ -1.88
XRN1-211ENST00000477237 CLSPNQ9HAW4 1339 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 AP4M1O00189 453 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms