RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 OR4Q2P0C623 313 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 LCP1P13796 627 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 SYN1P17600 705 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 SLC1A1P43005 524 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 ACADSBP45954 432 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 MRPL58Q14197 206 aaKnown RBP30.36■■■□□ 2.45
VEGFA-211ENST00000476772 BTG3Q14201 252 aaPredicted RBP30.36■■■□□ 2.45
VEGFA-211ENST00000476772 SCUBE3Q8IX30 993 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 KRT35Q92764 455 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 ZCWPW1Q9H0M4 648 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 MIF4GDA9UHW6 222 aaKnown RBP30.36■■■□□ 2.45
VEGFA-211ENST00000476772 DAB2IPQ5VWQ8 1189 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 EMC1Q8N766 993 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 MNS1Q8NEH6 495 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 ZMIZ2Q8NF64 920 aa30.36■■■□□ 2.45
VEGFA-211ENST00000476772 MRPL42Q9Y6G3 142 aaKnown RBP30.36■■■□□ 2.45
VEGFA-211ENST00000476772 PTPRDP23468 1912 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 MAN1A1P33908 653 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 MARCKSL1P49006 195 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 RABGGTBP53611 331 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 CTXN3Q4LDR2 81 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 RTP2Q5QGT7 225 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 ZNF280DQ6N043 979 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 KCNT2Q6UVM3 1135 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 TAS1R1Q7RTX1 841 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 ZDHHC17Q8IUH5 632 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 CEP112Q8N8E3 955 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-211ENST00000476772 CLEC4CQ8WTT0 213 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 IGSF21Q96ID5 467 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 KCNK16Q96T55 309 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 YME1L1Q96TA2 773 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 EHD2Q9NZN4 543 aa30.35■■■□□ 2.45
VEGFA-211ENST00000476772 PDE2AO00408 941 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-211ENST00000476772 BDNFP23560 247 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 CTNNA1P35221 906 aaKnown RBP30.34■■■□□ 2.45
VEGFA-211ENST00000476772 SLC6A3Q01959 620 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 SLC39A12Q504Y0 691 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 TMEM240Q5SV17 173 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 KCTD13Q8WZ19 329 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 ALG3Q92685 438 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 MS4A14Q96JA4 679 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 PBKQ96KB5 322 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.34■■■□□ 2.451e-13■■■□□ 14.7
VEGFA-211ENST00000476772 LCMT1Q9UIC8 334 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 USTQ9Y2C2 406 aa30.34■■■□□ 2.45
VEGFA-211ENST00000476772 EFEMP2O95967 443 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 CTNNA2P26232 953 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 RNASE9P60153 205 aaKnown RBP30.33■■■□□ 2.45
VEGFA-211ENST00000476772 ADIGQ0VDE8 80 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 UBL4BQ8N7F7 174 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 UBE2Q2Q8WVN8 375 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 ZNF558Q96NG5 402 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 SMARCAL1Q9NZC9 954 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 TMEM59LQ9UK28 342 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 CES2O00748 559 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 GRAP2O75791 330 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 CKAP4Q07065 602 aaKnown RBP30.33■■■□□ 2.45
VEGFA-211ENST00000476772 TAF5Q15542 800 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 DCAF12L1Q5VU92 463 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 PSRC1Q6PGN9 363 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-211ENST00000476772 C4orf50Q6ZRC1 276 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 SPATA2LQ8IUW3 424 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-211ENST00000476772 DCP1BQ8IZD4 617 aaKnown RBP30.33■■■□□ 2.45
VEGFA-211ENST00000476772 FNIP1Q8TF40 1166 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 TTPALQ9BTX7 342 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 CSNK1G1Q9HCP0 422 aa30.33■■■□□ 2.45
VEGFA-211ENST00000476772 CXXC1Q9P0U4 656 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-211ENST00000476772 CCDC66A2RUB6 948 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 PSMA2P25787 234 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 PEX5P50542 639 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 PIGHQ14442 188 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-211ENST00000476772 NIPA2Q8N8Q9 360 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 KHSRPQ92945 711 aaKnown RBP eCLIP30.32■■■□□ 2.441e-9■■■□□ 15.1
VEGFA-211ENST00000476772 HTATIP2Q9BUP3 242 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 VN1R3Q9BXE9 311 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 LRRC4Q9HBW1 653 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 ZMYND8Q9ULU4 1186 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-211ENST00000476772 PCDHA3Q9Y5H8 950 aa30.32■■■□□ 2.44
VEGFA-211ENST00000476772 OR6C75A6NL08 312 aa30.31■■■□□ 2.44
VEGFA-211ENST00000476772 F8VP50 259 aa30.31■■■□□ 2.44
VEGFA-211ENST00000476772 CCDC181Q5TID7 509 aa30.31■■■□□ 2.44
VEGFA-211ENST00000476772 TRNP1Q6NT89 227 aa30.31■■■□□ 2.44
VEGFA-211ENST00000476772 SLC39A11Q8N1S5 342 aa30.31■■■□□ 2.44
VEGFA-211ENST00000476772 HHLA1C9JL84 531 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 CEP104O60308 925 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 GJB5O95377 273 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 LAG3P18627 525 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 FLT3P36888 993 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 TERF1P54274 439 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 TAS2R40P59535 323 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 GPRIN1Q7Z2K8 1008 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 RNF168Q8IYW5 571 aaPredicted RBP30.3■■■□□ 2.44
VEGFA-211ENST00000476772 COLGALT1Q8NBJ5 622 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 DMAP1Q9NPF5 467 aaPredicted RBP30.3■■■□□ 2.44
VEGFA-211ENST00000476772 KIAA1671Q9BY89 1806 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 C2CD4BA6NLJ0 364 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 ADCY1Q08828 1119 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 ANKS3Q6ZW76 656 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 UBXN6Q9BZV1 441 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 617.3 ms