RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RIN3Q8TB24 985 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 STMN2Q93045 179 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 LENG1Q96BZ8 264 aaPredicted RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 TLE6Q9H808 572 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 STX18Q9P2W9 335 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 FEM1BQ9UK73 627 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 DNPEPQ9ULA0 475 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 TMCO1Q9UM00 188 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 ACTL7BQ9Y614 415 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 KRT38O76015 456 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 KRT10P13645 584 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 CD58P19256 250 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 ADRA1DP25100 572 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 GTF2H1P32780 548 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 HIRAP54198 1017 aaPredicted RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 NLRP11P59045 1033 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 HPCAP84074 193 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 DLG1Q12959 904 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -1.01
VAPB-205ENST00000476395 ZACNQ401N2 412 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 RNF111Q6ZNA4 994 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 TRMT1LQ7Z2T5 733 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 LRRC6Q86X45 466 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 PTCD3Q96EY7 689 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 FNBP1Q96RU3 617 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 SMC6Q96SB8 1091 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 BTBD10Q9BSF8 475 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 DHRS4Q9BTZ2 278 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 MAK16Q9BXY0 300 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 SEZ6LQ9BYH1 1024 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 FAM192AQ9GZU8 254 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 SLC38A10Q9HBR0 1119 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 MTUS1Q9ULD2 1270 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 ZNF711Q9Y462 761 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 ADGRA2Q96PE1 1338 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CNTNAP2Q9UHC6 1331 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CCDC160A6NGH7 325 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PDLIM1O00151 329 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PENKP01210 267 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 C1QAP02745 245 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ABHD2P08910 425 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CA4P22748 312 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ATICP31939 592 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 TRPC1P48995 793 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 RPS6P62753 249 aaKnown RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 ACAP1Q15027 740 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CCDC92Q53HC0 331 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 SFT2D3Q587I9 215 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 FAM102BQ5T8I3 360 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 RNASEH2BQ5TBB1 312 aaKnown RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 CES4AQ5XG92 561 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 SH2D5Q6ZV89 423 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 SYDE1Q6ZW31 735 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 ALYREFQ86V81 257 aaKnown RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 APLFQ8IW19 511 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 TMEM130Q8N3G9 435 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PPFIBP2Q8ND30 876 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ECSITQ9BQ95 431 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ARHGEF4Q9NR80 690 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 FARP1Q9Y4F1 1045 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 TRAFD1O14545 582 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 PRPF4O43172 522 aaKnown RBP eCLIP8.76□□□□□ -1.01
VAPB-205ENST00000476395 DCTN3O75935 186 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 EIF2AK2P19525 551 aaKnown RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 CETN2P41208 172 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 IZUMO3Q5VZ72 239 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 STYK1Q6J9G0 422 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 TDRPQ86YL5 185 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 KIAA0319LQ8IZA0 1049 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PYDC1Q8WXC3 89 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 KCNN1Q92952 543 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 TEPSINQ96N21 525 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 NT5C1BQ96P26 610 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 SLITRK1Q96PX8 696 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PANX3Q96QZ0 392 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 SYNCQ9H7C4 482 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ANAPC5Q9UJX4 755 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CCPG1Q9ULG6 757 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PAPPA2Q9BXP8 1791 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 MEI4A8MW99 385 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 H0YIN7 160 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 H3BRJ5 948 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ATP5HO75947 161 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ANPEPP15144 967 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 GJA8P48165 433 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 GDF10P55107 478 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PSMC5P62195 406 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 NCOA4Q13772 614 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 GK3PQ14409 553 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 FXNQ16595 210 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 HSF5Q4G112 596 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 LVRNQ6Q4G3 990 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 NLRX1Q86UT6 975 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PHF13Q86YI8 300 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms