RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
HDAC1-206ENST00000476391 RABGAP1Q9Y3P9 1069 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 MT-ND3P03897 115 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 CYP2D6P10635 497 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 CCT8P50990 548 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 COPAP53621 1224 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 SLC5A3P53794 718 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 GPX6P59796 221 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 PTP4A2Q12974 167 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 OASLQ15646 514 aaKnown RBP14.41□□□□□ -0.1
HDAC1-206ENST00000476391 HP1BP3Q5SSJ5 553 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-206ENST00000476391 LRGUKQ96M69 825 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 NSMCE3Q96MG7 304 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 GNPTGQ9UJJ9 305 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 SHOC2Q9UQ13 582 aa14.41□□□□□ -0.1
HDAC1-206ENST00000476391 MYOCOSA0A1B0GUC4 107 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 SDR42E2A6NKP2 422 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 CLASP2O75122 1294 aaKnown RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 KLHL2O95198 593 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 ADAMTS2O95450 1211 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 C8BP07358 591 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 AQP5P55064 265 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 GK3PQ14409 553 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 DCAF6Q58WW2 860 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 ESCO1Q5FWF5 840 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 RALGPS1Q5JS13 557 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 TMEM214Q6NUQ4 689 aaKnown RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 FBXW8Q8N3Y1 598 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 MARCH10Q8NA82 808 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 DCAKDQ8WVC6 231 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 GJA10Q969M2 543 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 CCDC124Q96CT7 223 aaKnown RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 RILPQ96NA2 401 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 TMEM47Q9BQJ4 181 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 REEP2Q9BRK0 252 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 ATAD3AQ9NVI7 634 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 MAST2Q6P0Q8 1798 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 IQANK1A0A1B0GTG1 560 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 FAM47E-STBD1D6RA91 191 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 TGFB1I1O43294 461 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 RALAP11233 206 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 CA8P35219 290 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 ADCY7P51828 1080 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 IL23RQ5VWK5 629 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 ITPRIPL1Q6GPH6 555 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 FASTKD5Q7L8L6 764 aaKnown RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 SDR16C5Q8N3Y7 309 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 HIPK4Q8NE63 616 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 LMO3Q8TAP4 145 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
HDAC1-206ENST00000476391 KLF6Q99612 283 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
HDAC1-206ENST00000476391 MYO3BQ8WXR4 1341 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 NHSL1Q5SYE7 1610 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 DENND3A2RUS2 1198 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 ERVV-2B6SEH9 535 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 MCF2LO15068 1137 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 TRPA1O75762 1119 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 GCNT3O95395 438 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 ZBTB11O95625 1053 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 PABPC1P11940 636 aaKnown RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 WASHC5Q12768 1159 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 UBAP2LQ14157 1087 aaKnown RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 CHRNA2Q15822 529 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 C6orf183Q5T699 404 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 GPR180Q86V85 440 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 DZIP1Q86YF9 867 aaKnown RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 CRLF3Q8IUI8 442 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 SEPT12Q8IYM1 358 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 TMIGD2Q96BF3 282 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 TTLL3Q9Y4R7 772 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 CLUHO75153 1309 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 SPATA31A5Q5VU36 1347 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 SPATA31A7Q8IWB4 1347 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 FAM189A1O60320 539 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 SULT1C4O75897 302 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 H6PDO95479 791 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 PROCP04070 461 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 CAPNS1P04632 268 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 FDX1P10109 184 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 PSMC3P17980 439 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 MAPK4P31152 587 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 HOXA10P31260 410 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 RFC4P35249 363 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 BST1Q10588 318 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 MTMR2Q13614 643 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 TFDP1Q14186 410 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 ADGRE1Q14246 886 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 MYBPC2Q14324 1141 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 SPOPLQ6IQ16 392 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 ZFP1Q6P2D0 407 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms