RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 SLC44A1Q8WWI5 657 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 POMGNT1Q8WZA1 660 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 HAUS1Q96CS2 278 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 PREBQ9HCU5 417 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 GALNT8Q9NY28 637 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 PI4KBQ9UBF8 816 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 GMEB1Q9Y692 573 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 IVNS1ABPQ9Y6Y0 642 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 SCNN1DP51172 638 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 PRPF39Q86UA1 669 aaKnown RBP18.52■□□□□ 0.56
CCM2-207ENST00000475551 COA1Q9GZY4 146 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 ZNRF3Q9ULT6 936 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 IKBKGQ9Y6K9 419 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 SIPA1L1O43166 1804 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 A6NJR5 290 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 DDX39AO00148 427 aaKnown RBP18.52■□□□□ 0.56
CCM2-207ENST00000475551 FAM155BO75949 473 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 CFHP08603 1231 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 CDKN2BP42772 138 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 FAAP100Q0VG06 881 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 USP4Q13107 963 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 SH2D4BQ5SQS7 431 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 ATG16L1Q676U5 607 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 C15orf39Q6ZRI6 1047 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 PDIK1LQ8N165 341 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 GINM1Q9NU53 330 aa18.52■□□□□ 0.56
CCM2-207ENST00000475551 A0A088AWK7 358 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 TMEM191CA6NGB0 347 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 AP1G1O43747 822 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 CSDE1O75534 798 aaKnown RBP18.51■□□□□ 0.55
CCM2-207ENST00000475551 LYPLA2O95372 231 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 TMEM191BP0C7N4 346 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 SFT2D3Q587I9 215 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 PASD1Q8IV76 773 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 TMEM161BQ8NDZ6 487 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 LZICQ8WZA0 190 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 TEKT1Q969V4 418 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 MXRA8Q9BRK3 442 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 KLHL4Q9C0H6 718 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 DNAAF2Q9NVR5 837 aaKnown RBP18.51■□□□□ 0.55
CCM2-207ENST00000475551 DDX56Q9NY93 547 aaKnown RBP18.51■□□□□ 0.55
CCM2-207ENST00000475551 SSX2IPQ9Y2D8 614 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 INHBAP08476 426 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 CPOXP36551 454 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 RGS2P41220 211 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 ERFP50548 548 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
CCM2-207ENST00000475551 MSLNQ13421 630 aaPredicted RBP18.51■□□□□ 0.55
CCM2-207ENST00000475551 BBS9Q3SYG4 887 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 MDH1BQ5I0G3 518 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 MAP3K21Q5TCX8 1036 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 FRMD8P1Q9BZ68 369 aaPredicted RBP18.51■□□□□ 0.55
CCM2-207ENST00000475551 GPRC5CQ9NQ84 441 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 ETNK2Q9NVF9 386 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 CIDEBQ9UHD4 219 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 SOX13Q9UN79 622 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 SORCS3Q9UPU3 1222 aa18.51■□□□□ 0.55
CCM2-207ENST00000475551 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 COPEO14579 308 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 ZNF862O60290 1169 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 SERPINA6P08185 405 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 VCLP18206 1134 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 ACO1P21399 889 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 CCNFP41002 786 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 RPL7AP62424 266 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 BST1Q10588 318 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 HIC1Q14526 733 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 DALRD3Q5D0E6 543 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 EFHC1Q5JVL4 640 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 ARID3BQ8IVW6 561 aaPredicted RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 SLC25A41Q8N5S1 370 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 LENG1Q96BZ8 264 aaPredicted RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 DGCR14Q96DF8 476 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 SRPK1Q96SB4 655 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 IQCGQ9H095 443 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 PTTG2Q9NZH5 202 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 TMCC1O94876 653 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 ITGA2BP08514 1039 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 RPL22P35268 128 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 QARSP47897 775 aaKnown RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 ABCB5Q2M3G0 1257 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 BRDTQ58F21 947 aaPredicted RBP18.5■□□□□ 0.55
CCM2-207ENST00000475551 WDR44Q5JSH3 913 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 SATL1Q86VE3 508 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 GSTCDQ8NEC7 633 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 SPIRE2Q8WWL2 714 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 E2F7Q96AV8 911 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 LTBP1Q14766 1721 aa18.5■□□□□ 0.55
CCM2-207ENST00000475551 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 TMEM63AO94886 807 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 FAM200BP0CF97 657 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 AOC1P19801 751 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 INHBCP55103 352 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 GDF10P55107 478 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 USP46P62068 366 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 ZNF252P-AS1Q0IIN9 211 aa18.49■□□□□ 0.55
CCM2-207ENST00000475551 TBC1D10BQ4KMP7 808 aaPredicted RBP18.49■□□□□ 0.55
CCM2-207ENST00000475551 SLC39A4Q6P5W5 647 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms