RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
SDHB-205ENST00000475506 UNC45AQ9H3U1 944 aa6.32□□□□□ -1.4
SDHB-205ENST00000475506 SEC61A2Q9H9S3 476 aa6.32□□□□□ -1.4
SDHB-205ENST00000475506 TMEM160Q9NX00 188 aa6.32□□□□□ -1.4
SDHB-205ENST00000475506 TCAF2A6NFQ2 919 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 BTBD11A6QL63 1104 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 B4E171 279 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 ADM5C9JUS6 153 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 J3KTA2 159 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 RFXAPO00287 272 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TK1P04183 234 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 INHBBP09529 407 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TAL1P17542 331 aaPredicted RBP6.31□□□□□ -1.4
SDHB-205ENST00000475506 NTSR1P30989 418 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 ELF1P32519 619 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TSPAN7P41732 249 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 LOXL3P58215 753 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 LINC00310P59036 64 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 PPP2CBP62714 309 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 PPP2CAP67775 309 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TLE2Q04725 743 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 ZNF844Q08AG5 666 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 GPS1Q13098 491 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 NBPF8Q3BBV2 869 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TRIM60Q495X7 471 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TSHZ3Q63HK5 1081 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.31□□□□□ -1.4
SDHB-205ENST00000475506 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 TAX1BP1Q86VP1 789 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.31□□□□□ -1.4
SDHB-205ENST00000475506 SMCR8Q8TEV9 937 aaPredicted RBP6.31□□□□□ -1.4
SDHB-205ENST00000475506 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 VPS16Q9H269 839 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 GBA2Q9HCG7 927 aaPredicted RBP6.31□□□□□ -1.4
SDHB-205ENST00000475506 MSL2Q9HCI7 577 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 RASSF1Q9NS23 344 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 BLOC1S4Q9NUP1 217 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 PLA2G3Q9NZ20 509 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
SDHB-205ENST00000475506 CCDC195A0A1B0GUA6 201 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 DYTNA2CJ06 578 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 CD3EAPO15446 510 aaKnown RBP6.3□□□□□ -1.4
SDHB-205ENST00000475506 RGS10O43665 173 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 TAF5LO75529 589 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 TBX18O95935 607 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 VIPP01282 170 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 CSF1RP07333 972 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 MGAT1P26572 445 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 LRPAP1P30533 357 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 AKT1P31749 480 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 PAPOLAP51003 745 aaKnown RBP6.3□□□□□ -1.4
SDHB-205ENST00000475506 ACTR2P61160 394 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 KIAA2012Q0VF49 1180 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 FOXL1Q12952 345 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 DLGAP5Q15398 846 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 FAAH2Q6GMR7 532 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 RHOT2Q8IXI1 618 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 OR6Y1Q8NGX8 325 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 TMEM171Q8WVE6 324 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 RRP36Q96EU6 259 aaKnown RBP6.3□□□□□ -1.4
SDHB-205ENST00000475506 ZBTB45Q96K62 511 aaPredicted RBP6.3□□□□□ -1.4
SDHB-205ENST00000475506 OR14A2Q96R54 314 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 TWNKQ96RR1 684 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 PNKPQ96T60 521 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
SDHB-205ENST00000475506 TMOD4Q9NZQ9 345 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 NDRG4Q9ULP0 352 aaKnown RBP6.3□□□□□ -1.4
SDHB-205ENST00000475506 CLCA2Q9UQC9 943 aa6.3□□□□□ -1.4
SDHB-205ENST00000475506 FER1L4A9Z1Z3 1794 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 ZNF185O15231 689 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 PPP6R2O75170 966 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 ZFPL1O95159 310 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 RXRAP19793 462 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
SDHB-205ENST00000475506 RABGGTBP53611 331 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 EPHB4P54760 987 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 NHLH2Q02577 135 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 SLC12A1Q13621 1099 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 TTC22Q5TAA0 569 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 ATPAF1Q5TC12 328 aaPredicted RBP6.29□□□□□ -1.4
SDHB-205ENST00000475506 RINT1Q6NUQ1 792 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 CFAP161Q6P656 301 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 LAYNQ6UX15 382 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 ARHGEF18Q6ZSZ5 1173 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 NRSN1Q8IZ57 195 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 OR56A1Q8NGH5 318 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 SDCCAG3Q96C92 435 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 GRAMD1AQ96CP6 724 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 FAM84AQ96KN4 292 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 PTDSS2Q9BVG9 487 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 TEX101Q9BY14 249 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 DNAJB11Q9UBS4 358 aa6.29□□□□□ -1.4
SDHB-205ENST00000475506 SSX2IPQ9Y2D8 614 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms