RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TMEM150AQ86TG1 271 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 SMYD4Q8IYR2 804 aaPredicted RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 FMR1NBQ8N0W7 255 aaPredicted RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 GUF1Q8N442 669 aaKnown RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 TRMT2BQ96GJ1 504 aaKnown RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 LRRC3BQ96PB8 259 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 DPEP3Q9H4B8 488 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 SMYD3Q9H7B4 428 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 MMRN2Q9H8L6 949 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDPN-204ENST00000475043 TDP1Q9NUW8 608 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 OBP2AQ9NY56 170 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 GTSE1Q9NYZ3 720 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 HELZP42694 1942 aaKnown RBP10.04□□□□□ -0.8
PDPN-204ENST00000475043 ANAPC1Q9H1A4 1944 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 SHISA7A6NL88 538 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 F8VP50 259 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 ARNTLO00327 626 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 IKBKBO14920 756 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 TRIM66O15016 1216 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 TADA3O75528 432 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 AKAP3O75969 853 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 CKMP06732 381 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 FAM163BP0C2L3 166 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 P4HA1P13674 534 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 WEE1P30291 646 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 PSMC2P35998 433 aaKnown RBP10.04□□□□□ -0.8
PDPN-204ENST00000475043 PIK3CAP42336 1068 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 MAGEA9P43362 315 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 RPS9P46781 194 aaKnown RBP10.04□□□□□ -0.8
PDPN-204ENST00000475043 TNK2Q07912 1038 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 IFRD2Q12894 506 aaPredicted RBP10.04□□□□□ -0.8
PDPN-204ENST00000475043 ADAM9Q13443 819 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 SGSM1Q2NKQ1 1148 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 ZACNQ401N2 412 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 CC2D1AQ6P1N0 951 aaPredicted RBP10.04□□□□□ -0.8
PDPN-204ENST00000475043 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 SV2AQ7L0J3 742 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 MON1AQ86VX9 555 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 FAM186BQ8IYM0 893 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 B3GALNT2Q8NCR0 500 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 USP13Q92995 863 aaPredicted RBP10.04□□□□□ -0.8
PDPN-204ENST00000475043 TATDN2Q93075 761 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 CLDN23Q96B33 292 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 EEF2KMTQ96G04 330 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 MYRFLQ96LU7 910 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 CYP2S1Q96SQ9 504 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 MED10Q9BTT4 135 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 ELOVL4Q9GZR5 314 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 VRTNQ9H8Y1 702 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 LMAN1LQ9HAT1 526 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 GKN1Q9NS71 199 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 RMND1Q9NWS8 449 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 CCL26Q9Y258 94 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 NME7Q9Y5B8 376 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 R4GN57 208 aa10.04□□□□□ -0.8
PDPN-204ENST00000475043 TRAV19A0A0A6YYK7 116 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 PRR23AA6NEV1 266 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 SOBPA7XYQ1 873 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 SPECC1L-ADORA2AF8WAN1 911 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 CLDN5O00501 218 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 MAPK13O15264 365 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 ABL1P00519 1130 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 HLA-DRAP01903 254 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 SP9P0CG40 484 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 TRIM49P0CI25 452 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 TRIM49CP0CI26 452 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 GCLMP48507 274 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 USP46P62068 366 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 PLCB2Q00722 1185 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 CSTF1Q05048 431 aaKnown RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 FZD5Q13467 585 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 NFIL3Q16649 462 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 SPOPLQ6IQ16 392 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 ZC3H14Q6PJT7 736 aaKnown RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 INTS8Q75QN2 995 aaKnown RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 ASCL5Q7RTU5 278 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 ARL14EPQ8N8R7 260 aaPredicted RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 TAF4BQ92750 862 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 ERCC4Q92889 916 aaPredicted RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 SMARCE1Q969G3 411 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 MSANTD3Q96H12 275 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 B3GNT5Q9BYG0 378 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 IMPG2Q9BZV3 1241 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 ZNF518BQ9C0D4 1074 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 SDCBP2Q9H190 292 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 EBF3Q9H4W6 596 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 C8orf33Q9H7E9 229 aaPredicted RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 KIF9Q9HAQ2 790 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 EHD2Q9NZN4 543 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 TRPM5Q9NZQ8 1165 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms