RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 DENND5BQ6ZUT9 1274 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 TRAPPC11Q7Z392 1133 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 RDH13Q8NBN7 331 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 LINC00301Q8NCQ3 95 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 ACDQ96AP0 544 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 INTS4Q96HW7 963 aaKnown RBP15.34■□□□□ 0.05
COL2A1-205ENST00000474996 MRPL45Q9BRJ2 306 aaKnown RBP15.34■□□□□ 0.05
COL2A1-205ENST00000474996 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 LRRC27Q9C0I9 530 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 DUSP15Q9H1R2 295 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-205ENST00000474996 ZSCAN16Q9H4T2 348 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-205ENST00000474996 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 KBTBD4Q9NVX7 518 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 TRPM5Q9NZQ8 1165 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 NME7Q9Y5B8 376 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 CHD8Q9HCK8 2581 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 LEFTY2O00292 366 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL2A1-205ENST00000474996 STX6O43752 255 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 NFATC1O95644 943 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 CST3P01034 146 aaPredicted RBP15.33■□□□□ 0.04
COL2A1-205ENST00000474996 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
COL2A1-205ENST00000474996 OPRD1P41143 372 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 PDE6CP51160 858 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 ASIC1P78348 528 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 SNRNP35Q16560 246 aaKnown RBP15.33■□□□□ 0.04
COL2A1-205ENST00000474996 MDH1BQ5I0G3 518 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 STPG1Q5TH74 334 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 EPM2AIP1Q7L775 607 aaPredicted RBP15.33■□□□□ 0.04
COL2A1-205ENST00000474996 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 MYCBPAPQ8TBZ2 947 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 ZNF507Q8TCN5 953 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 DHX58Q96C10 678 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 SNX25Q9H3E2 840 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 AGPAT3Q9NRZ7 376 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 EBF1Q9UH73 591 aa15.33■□□□□ 0.04
COL2A1-205ENST00000474996 LAMA1P25391 3075 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 ABCA7Q8IZY2 2146 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 ZNF840PA6NDX5 716 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 ANTXRLA6NF34 631 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 F8VP50 259 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TM4SF5O14894 197 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TRIM66O15016 1216 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 CLIC2O15247 247 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 SPTLC2O15270 562 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TGFB1I1O43294 461 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 ABL1P00519 1130 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 PFKLP17858 780 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TNNI1P19237 187 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 GNL1P36915 607 aaPredicted RBP15.32■□□□□ 0.04
COL2A1-205ENST00000474996 CYP2J2P51589 502 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 DGKEP52429 567 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 SEC13P55735 322 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 ELF2Q15723 593 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 GAB4Q2WGN9 574 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 C2orf27AQ580R0 203 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 FAM26FQ5R3K3 315 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TCEAL6Q6IPX3 200 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TSTD1Q8NFU3 115 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 OR6B3Q8NGW1 331 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TCEAL3Q969E4 200 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 CCDC127Q96BQ5 260 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 FNBP1Q96RU3 617 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 CGRRF1Q99675 332 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 RNF38Q9H0F5 515 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 CUEDC2Q9H467 287 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 DPEP3Q9H4B8 488 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 VPS45Q9NRW7 570 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 EHD2Q9NZN4 543 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 TFIP11Q9UBB9 837 aaKnown RBP15.32■□□□□ 0.04
COL2A1-205ENST00000474996 INVSQ9Y283 1065 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 NUP205Q92621 2012 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 MYOFQ9NZM1 2061 aa15.32■□□□□ 0.04
COL2A1-205ENST00000474996 THADAQ6YHU6 1953 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 K7EQS6 105 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
COL2A1-205ENST00000474996 PPP6R2O75170 966 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 TACC1O75410 805 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 GBP1P32455 592 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 CACNA2D1P54289 1103 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 TNNC1P63316 161 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 NOP14P78316 857 aaKnown RBP15.31■□□□□ 0.04
COL2A1-205ENST00000474996 SLC7A9P82251 487 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 AMPD3Q01432 767 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 CREB5Q02930 508 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 CYP24A1Q07973 514 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 PSMD6Q15008 389 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 WDR72Q3MJ13 1102 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
COL2A1-205ENST00000474996 FILIP1Q7Z7B0 1213 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 USP33Q8TEY7 942 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 C8orf48Q96LL4 319 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 TPSD1Q9BZJ3 242 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 TMEM30AQ9NV96 361 aa15.31■□□□□ 0.04
COL2A1-205ENST00000474996 SMPD4Q9NXE4 827 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms