RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 LACC1Q8IV20 430 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 KLHL7Q8IXQ5 586 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PELI3Q8N2H9 469 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CCDC82Q8N4S0 544 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 HELQQ8TDG4 1101 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PPP4R1Q8TF05 950 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 VTI1AQ96AJ9 217 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 EME1Q96AY2 570 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 RBM33Q96EV2 1170 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 OXNAD1Q96HP4 312 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 ACO2Q99798 780 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 NMUR2Q9GZQ4 415 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 ST14Q9Y5Y6 855 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 IGLV3-22A0A075B6J6 115 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 HGSO14964 777 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 BMP1P13497 986 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 ATP5DP30049 168 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 ADARP55265 1226 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 ARL4CP56559 192 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PTK7Q13308 1070 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 ASIC2Q16515 512 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MSS51Q4VC12 460 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SLC10A5Q5PT55 438 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MAP3K21Q5TCX8 1036 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MEX3CQ5U5Q3 659 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 MBLAC2Q68D91 279 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PMF1Q6P1K2 205 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 C1orf228Q6PIY5 440 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 IZUMO2Q6UXV1 221 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CDHR3Q6ZTQ4 885 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SPRED1Q7Z699 444 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 RALYLQ86SE5 291 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 GLRX5Q86SX6 157 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 GLIS1Q8NBF1 620 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 FLAD1Q8NFF5 587 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 OR13F1Q8NGS4 319 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 FBF1Q8TES7 1133 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MPP4Q96JB8 637 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 NACC1Q96RE7 527 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 NPLQ9BXD5 320 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 ARMT1Q9H993 441 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MAGEE1Q9HCI5 957 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 KCND2Q9NZV8 630 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CORINQ9Y5Q5 1042 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SLC4A4Q9Y6R1 1079 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PMF1-BGLAPU3KQ54 211 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 LAMA3Q16787 3333 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MTCL1Q9Y4B5 1905 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 CNTNAP4Q9C0A0 1308 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 A0A1W2PPM1 405 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TNFRSF10AO00220 468 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TBX3O15119 743 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 LIASO43766 372 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 WISP3O95389 354 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 FGFR1OPO95684 399 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 JUNP05412 331 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 PDHA1P08559 390 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CYP19A1P11511 503 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 CYP2C9P11712 490 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 BRAFP15056 766 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MYF6P23409 242 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CHMP24386 653 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CD68P34810 354 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 GRIA3P42263 894 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 RXRGP48443 463 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 NLRP6P59044 892 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SLC10A2Q12908 348 aaPredicted RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 TRIM29Q14134 588 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 HERC3Q15034 1050 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PKN2Q16513 984 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 LRRC38Q5VT99 294 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TPTE2Q6XPS3 522 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 RBM44Q6ZP01 1051 aaKnown RBP4.3□□□□□ -1.72
USP16-205ENST00000474835 C1orf186Q6ZWK4 172 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 RIC3Q7Z5B4 369 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PPM1NQ8N819 430 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 ANKFN1Q8N957 763 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 GOLM1Q8NBJ4 401 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 MINDY2Q8NBR6 621 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SLC44A1Q8WWI5 657 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SLC7A3Q8WY07 619 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TFAP2CQ92754 450 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 KREMEN1Q96MU8 473 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 ALPK1Q96QP1 1244 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 RUFY1Q96T51 708 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PPP1R12CQ9BZL4 782 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 UNC45AQ9H3U1 944 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PSTPIP2Q9H939 334 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 C12orf10Q9HB07 376 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 PLGRKTQ9HBL7 147 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 VPS45Q9NRW7 570 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 CHST7Q9NS84 486 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TMOD4Q9NZQ9 345 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TMEM9Q9P0T7 183 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 GGT7Q9UJ14 662 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 SHOC2Q9UQ13 582 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 UGT2A1Q9Y4X1 527 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms