RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 M0QYV0 167 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 XPO1O14980 1071 aaKnown RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 HCRTO43612 131 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 TRAPPC3O43617 180 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ATP2C2O75185 946 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 SLU7O95391 586 aaKnown RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ERBB2P04626 1255 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 PDGFRBP09619 1106 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 TKTP29401 623 aaKnown RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 CTNNA1P35221 906 aaKnown RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ACADSBP45954 432 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 BRCC3P46736 316 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 SLC11A1P49279 550 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 TUBB4BP68371 445 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 PDE4CQ08493 712 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 BST2Q10589 180 aaKnown RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ACAP1Q15027 740 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 RPS6KA1Q15418 735 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 GOLGA7BQ2TAP0 167 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 INTS6LQ5JSJ4 861 aaKnown RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 RAB41Q5JT25 222 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 LRRC38Q5VT99 294 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 PMF1Q6P1K2 205 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 C16orf59Q7L2K0 433 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 DAAM2Q86T65 1068 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 GPR65Q8IYL9 337 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ABI1Q8IZP0 508 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 SCML4Q8N228 414 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 LRRC43Q8N309 656 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 CEP112Q8N8E3 955 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 MSANTD4Q8NCY6 345 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 UBA3Q8TBC4 463 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 PBKQ96KB5 322 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 OSBPL9Q96SU4 736 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 SYT15Q9BQS2 421 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 COLEC11Q9BWP8 271 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 OXCT2Q9BYC2 517 aaPredicted RBP6.98□□□□□ -1.29
ATG4A-207ENST00000474825 B3GNT5Q9BYG0 378 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 CARD9Q9H257 536 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 PNPLA8Q9NP80 782 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 IL23AQ9NPF7 189 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 ADAM28Q9UKQ2 775 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 AMFRQ9UKV5 643 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 LRFN2Q9ULH4 789 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 PCDHA3Q9Y5H8 950 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 LTBP2Q14767 1821 aa6.98□□□□□ -1.29
ATG4A-207ENST00000474825 CCDC66A2RUB6 948 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 MYBPHLA2RUH7 354 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 C2CD4BA6NLJ0 364 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 HHLA1C9JL84 531 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 F8W810 466 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 MYO1FO00160 1098 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 TULP2O00295 520 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 PAPSS1O43252 624 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 TADA3O75528 432 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CLSTN1O94985 981 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 FTCDO95954 541 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CCDC130P13994 396 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CSF2RAP15509 400 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 RAG1P15918 1043 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 NPR3P17342 541 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 COMTP21964 271 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 SSTR3P32745 418 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 RFC1P35251 1148 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 OR1G1P47890 313 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 GATMP50440 423 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 NAP1L1P55209 391 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 SNX16P57768 344 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 WDR5P61964 334 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 RPL7AP62424 266 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 OGDHQ02218 1023 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 YWHAHQ04917 246 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 SMARCB1Q12824 385 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 ELAVL2Q12926 359 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 PIGHQ14442 188 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 MAPRE1Q15691 268 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 C2CD6Q53TS8 623 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 OVOS1Q6IE37 1185 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 LLGL2Q6P1M3 1020 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 DNAJC24Q6P3W2 148 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 BLOC1S3Q6QNY0 202 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 OLFML1Q6UWY5 402 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CLEC20AQ6ZU45 233 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 RSRC2Q7L4I2 434 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 SLC26A9Q7LBE3 791 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 PEX26Q7Z412 305 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 BNIPLQ7Z465 357 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 DEFB128Q7Z7B8 93 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 LRRTM3Q86VH5 581 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 METTL23Q86XA0 190 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CMTR2Q8IYT2 770 aaKnown RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 THEM5Q8N1Q8 247 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 ZMIZ2Q8NF64 920 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 OR10T2Q8NGX3 314 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 SLC2A14Q8TDB8 520 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 ACTRT1Q8TDG2 376 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms