RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CCDC130P13994 396 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CPB1P15086 417 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 UCHL3P15374 230 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 ATF6P18850 670 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 KCNA4P22459 653 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 TBXAS1P24557 533 aaPredicted RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CLCN1P35523 988 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 GPR15P49685 360 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 JAM2P57087 298 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CREMQ03060 361 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CETN1Q12798 172 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 BMS1Q14692 1282 aaKnown RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CFAP221Q4G0U5 840 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF394Q53GI3 561 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 SDHAF4Q5VUM1 108 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 TMEM270Q6UE05 265 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 PPFIBP1Q86W92 1011 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 UNC93AQ86WB7 457 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 FAM71AQ8IYT1 594 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 THEM5Q8N1Q8 247 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CCDC150Q8NCX0 1101 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 STKLD1Q8NE28 680 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 ZMIZ2Q8NF64 920 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 OLIG1Q8TAK6 271 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 SLC7A14Q8TBB6 771 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 PPP2R3CQ969Q6 453 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 MYLPFQ96A32 169 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 OXCT2Q9BYC2 517 aaPredicted RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF518BQ9C0D4 1074 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 XPO4Q9C0E2 1151 aaKnown RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 TTYH3Q9C0H2 523 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 PLEKHA4Q9H4M7 779 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 FAM207AQ9NSI2 230 aaPredicted RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 FAM49BQ9NUQ9 324 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 IFNKQ9P0W0 207 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CEP72Q9P209 647 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 DNAJC12Q9UKB3 198 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 INSL5Q9Y5Q6 135 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 GCN1Q92616 2671 aaKnown RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 A0A1W2PQC6 194 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 GOLGA6L19H0YKK7 550 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 O00370 1275 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 C8AP07357 584 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 BDNFP23560 247 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 MAGEA11P43364 429 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 UBASH3AP57075 661 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 POLR2FP61218 127 aaKnown RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 TSPY1Q01534 308 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 LMNB2Q03252 620 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 DRAP1Q14919 205 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 NFE2Q16621 373 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 ARHGAP44Q17R89 818 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 UVSSAQ2YD98 709 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 PPP1R26Q5T8A7 1209 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 E4F1Q66K89 784 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 SARM1Q6SZW1 724 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 TMC5Q6UXY8 1006 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 GPIHBP1Q8IV16 184 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 DCP1BQ8IZD4 617 aaKnown RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 CMASQ8NFW8 434 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 SLC2A14Q8TDB8 520 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 GPR152Q8TDT2 470 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 HDAC7Q8WUI4 952 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 BAP1Q92560 729 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 CASP10Q92851 521 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 JAKMIP2Q96AA8 810 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 TMEM176AQ96HP8 235 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 KCNK16Q96T55 309 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 HNRNPABQ99729 332 aaKnown RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 SMOQ99835 787 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 FAM124BQ9H5Z6 455 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 CYP4F11Q9HBI6 524 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 ABCB6Q9NP58 842 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 HCFC1R1Q9NWW0 138 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 ABI2Q9NYB9 513 aaPredicted RBP7.42□□□□□ -1.22
LIMD1-204ENST00000474665 HSFX1Q9UBD0 423 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 MAFFQ9ULX9 164 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 USP18Q9UMW8 372 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 YIPF1Q9Y548 306 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 PCDHB5Q9Y5E4 795 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
LIMD1-204ENST00000474665 CCDC195A0A1B0GUA6 201 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 C1QTNF9BB2RNN3 333 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 HHLA1C9JL84 531 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 F8VP50 259 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 F8VZ95 297 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TULP2O00295 520 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 STK25O00506 426 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 PRRG1O14668 218 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CCL16O15467 120 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CYP26A1O43174 497 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 MOSPD3O75425 235 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CLSTN1O94985 981 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms