RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-209ENST00000474647 CLIC4Q9Y696 253 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 FAM208BQ5VWN6 2430 aa14.98□□□□□ -0.01
CCDC78-209ENST00000474647 IGF2RP11717 2491 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 ANTXRLA6NF34 631 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 PATE3B3GLJ2 98 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 SCAMP3O14828 347 aaKnown RBP14.97□□□□□ -0.01
CCDC78-209ENST00000474647 KHNYNO15037 678 aaKnown RBP14.97□□□□□ -0.01
CCDC78-209ENST00000474647 ABL1P00519 1130 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 BCKDHBP21953 392 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 GARTP22102 1010 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 BDNFP23560 247 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 OPRD1P41143 372 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 PDE6CP51160 858 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 SOWAHAQ2M3V2 549 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 SH3PXD2AQ5TCZ1 1133 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 C11orf74Q86VG3 221 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 MDGA1Q8NFP4 955 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 CXorf38Q8TB03 319 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 SPATA18Q8TC71 538 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 USP33Q8TEY7 942 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 DNAJC19Q96DA6 116 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 FGFBP2Q9BYJ0 223 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 TMEM9BQ9NQ34 198 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 ARHGAP26Q9UNA1 814 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
CCDC78-209ENST00000474647 PTPRJQ12913 1337 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 C1QTNF9BB2RNN3 333 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 K7EQS6 105 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 LEFTY2O00292 366 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 GABRDO14764 452 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 PROS1P07225 676 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 C1QTNF9P0C862 333 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 LMO2P25791 158 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 MAGEA11P43364 429 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 USP46P62068 366 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 UAP1L1Q3KQV9 507 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 UNQ6494/PRO21346Q6UXR6 183 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 DENND5BQ6ZUT9 1274 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 FILIP1Q7Z7B0 1213 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 GPD1LQ8N335 351 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 PIGKQ92643 395 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 HPDLQ96IR7 371 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.01
CCDC78-209ENST00000474647 CLIC6Q96NY7 704 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 OLFML3Q9NRN5 406 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 TRPM5Q9NZQ8 1165 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 CDH9Q9ULB4 789 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 MMP17Q9ULZ9 603 aa14.96□□□□□ -0.01
CCDC78-209ENST00000474647 PCNX2A6NKB5 2137 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 CACNA1GO43497 2377 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 PRPF6O94906 941 aaKnown RBP14.95□□□□□ -0.02
CCDC78-209ENST00000474647 TNNC2P02585 160 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 CYP17A1P05093 508 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 PDGFRBP09619 1106 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 TCF3P15923 654 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 SPINK2P20155 84 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 STAT6P42226 847 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 ZXDBP98169 803 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 CEBPZQ03701 1054 aaKnown RBP14.95□□□□□ -0.02
CCDC78-209ENST00000474647 IFRD2Q12894 506 aaPredicted RBP14.95□□□□□ -0.02
CCDC78-209ENST00000474647 ALCAMQ13740 583 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 FAM171BQ6P995 826 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 ARMCX6Q7L4S7 300 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 RASSF3Q86WH2 238 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 ALLCQ8N6M5 410 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 OR5B17Q8NGF7 314 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 KBTBD7Q8WVZ9 684 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 SPATA17Q96L03 361 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 MMS19Q96T76 1030 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 CRTAC1Q9NQ79 661 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 PANK4Q9NVE7 773 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 INTS13Q9NVM9 706 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 SMPD4Q9NXE4 827 aa14.95□□□□□ -0.02
CCDC78-209ENST00000474647 BCCIPQ9P287 314 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC78-209ENST00000474647 FBXO2Q9UK22 296 aaPredicted RBP14.95□□□□□ -0.02
CCDC78-209ENST00000474647 NBEAQ8NFP9 2946 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 TRIM66O15016 1216 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 ALDH1A2O94788 518 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 KLF8O95600 359 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-209ENST00000474647 TIE1P35590 1138 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 KDSRQ06136 332 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
CCDC78-209ENST00000474647 CRY1Q16526 586 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 MDH1BQ5I0G3 518 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 VSTM1Q6UX27 236 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 SFTPA1Q8IWL2 248 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 TXNDC5Q8NBS9 432 aaKnown RBP14.94□□□□□ -0.02
CCDC78-209ENST00000474647 RLN3Q8WXF3 142 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 PCED1BQ96HM7 432 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 SPACA7Q96KW9 195 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 PANK2Q9BZ23 570 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 ZDHHC4Q9NPG8 344 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 CPQQ9Y646 472 aa14.94□□□□□ -0.02
CCDC78-209ENST00000474647 ATXN2Q99700 1313 aaKnown RBP14.93□□□□□ -0.02
CCDC78-209ENST00000474647 TP53BP1Q12888 1972 aaPredicted RBP14.93□□□□□ -0.02
CCDC78-209ENST00000474647 PCDH15Q96QU1 1955 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 F8VP50 259 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 MAP3K13O43283 966 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms