RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 KRT19P08727 400 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GOLGA6DP0CG33 693 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 DLATP10515 647 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 P4HA1P13674 534 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TKTP29401 623 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 POLR2BP30876 1174 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 BRCC3P46736 316 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CLCN4P51793 760 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GUCY2FP51841 1108 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GSCP56915 257 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 MRPS5P82675 430 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 BFSP1Q12934 665 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 MRPL58Q14197 206 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 RPS6KA1Q15418 735 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 ANKRD54Q6NXT1 300 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 DPH6Q7L8W6 267 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 ADGRD2Q7Z7M1 963 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 RBM23Q86U06 439 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SUGP1Q8IWZ8 645 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 KLHL7Q8IXQ5 586 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 IFT20Q8IY31 132 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 THEM5Q8N1Q8 247 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TMEM86AQ8N2M4 240 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TOP6BLQ8N6T0 577 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 C3orf58Q8NDZ4 430 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 FAM76AQ8TAV0 307 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 LNX1Q8TBB1 728 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 ARL8AQ96BM9 186 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CCDC127Q96BQ5 260 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SENP8Q96LD8 212 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 DNAI2Q9GZS0 605 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SIX2Q9NPC8 291 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GDAP2Q9NXN4 497 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GOLGA6AQ9NYA3 693 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CACNG4Q9UBN1 327 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CD207Q9UJ71 328 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 AJAP1Q9UKB5 411 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 BZW2Q9Y6E2 419 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 A0A087WUV0 522 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TMCO5BA8MYB1 307 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 DDX3XO00571 662 aaKnown RBP eCLIP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 C2CD2LO14523 706 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CYB561D2O14569 222 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TEX28O15482 410 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CEP104O60308 925 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 HUS1O60921 280 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GFPT2O94808 682 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 OAZ2O95190 189 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 KRT14P02533 472 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 POU2F2P09086 479 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CNPP09543 421 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 HNRNPH1P31943 449 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CCT5P48643 541 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 LHX1P48742 406 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 WNT7BP56706 349 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TNNC1P63316 161 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 YWHAHQ04917 246 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SMARCB1Q12824 385 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SMAD4Q13485 552 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 KCNC3Q14003 757 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 RAB33AQ14088 237 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CTXN3Q4LDR2 81 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 RTP2Q5QGT7 225 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 VARS2Q5ST30 1063 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 C10orf76Q5T2E6 689 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SWT1Q5T5J6 900 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 ALS2CLQ60I27 953 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TPGS2Q68CL5 300 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 KCTD16Q68DU8 428 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TTC19Q6DKK2 380 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 OVOS1Q6IE37 1185 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 EMBQ6PCB8 327 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 CCDC149Q6ZUS6 474 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 DCP1BQ8IZD4 617 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 C2orf15Q8WU43 125 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 AUTS2Q8WXX7 1259 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 BORCS6Q96GS4 357 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 HPDLQ96IR7 371 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 FAXDC2Q96IV6 333 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 AP1M1Q9BXS5 423 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 MFRPQ9BY79 579 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 RHOBTB2Q9BYZ6 727 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 VRTNQ9H8Y1 702 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 SFXN1Q9H9B4 322 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 TMEM8AQ9HCN3 771 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GDF3Q9NR23 364 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 GCNT4Q9P109 453 aa4.42□□□□□ -1.7
GAPVD1-216ENST00000474637 VWA8A3KMH1 1905 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 BTNL10A8MVZ5 291 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PPEF2O14830 753 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PER2O15055 1255 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PMM2O15305 246 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 RAD51CO43502 376 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 OPA1O60313 960 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 HSF2BPO75031 334 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 C4BPAP04003 597 aaKnown RBP4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 HNRNPA1P09651 372 aaKnown RBP eCLIP4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 HOXA9P31269 272 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms