RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CCNIQ14094 377 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 DBN1Q16643 649 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 KLHDC10Q6PID8 442 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 SPOCD1Q6ZMY3 1216 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 SV2AQ7L0J3 742 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 PIP4K2CQ8TBX8 421 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 C10orf88Q9H8K7 445 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 IVNS1ABPQ9Y6Y0 642 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 KAT6AQ92794 2004 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 BTBD19C9JJ37 291 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 SORBS2O94875 1100 aaKnown RBP19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 GTF2H1P32780 548 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 CACNB3P54284 484 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 MCCD1P59942 119 aaPredicted RBP19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 TRIP10Q15642 601 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 TBCCQ15814 346 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 FAM182BQ5T319 152 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 PLEKHA7Q6IQ23 1121 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 ZNF677Q86XU0 584 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 SIAH1Q8IUQ4 282 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 CATSPER2Q96P56 530 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 IQCGQ9H095 443 aaKnown RBP19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 IKBKGQ9Y6K9 419 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 TMEM63AO94886 807 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 HLA-DOAP06340 250 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 C6orf222P0C671 652 aaPredicted RBP19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 RPL5P46777 297 aaKnown RBP19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 RPL7AP62424 266 aaKnown RBP19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 SFSWAPQ12872 951 aaKnown RBP19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 SLC44A1Q8WWI5 657 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 ZNF577Q9BSK1 485 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 hCG_1818297A0A087WSY0 165 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 CCDC195A0A1B0GUA6 201 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 COPEO14579 308 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 SLC16A4O15374 487 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 SERPINA6P08185 405 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 INHBAP08476 426 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 CDK4P11802 303 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 FOLH1Q04609 750 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 TCP10Q12799 353 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 KBTBD12Q3ZCT8 623 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 TXNRD3NBQ6F5E7 133 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 IGDCC3Q8IVU1 814 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 METTL25Q8N6Q8 603 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 RILPQ96NA2 401 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 WDR11Q9BZH6 1224 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 TMEM165Q9HC07 324 aa19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 SAE1Q9UBE0 346 aaPredicted RBP19.42■□□□□ 0.7
ECHDC1-214ENST00000474289 TCRBV9S1A1TA0A576 114 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CCNT2O60583 730 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 ARP10275 920 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 MAGEA10P43363 369 aaPredicted RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 NOMO3P69849 1222 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 TEX44Q53QW1 395 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 RALGPS1Q5JS13 557 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 DUS1LQ6P1R4 473 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 C1orf228Q6PIY5 440 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 ISLR2Q6UXK2 745 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 ENOSF1Q7L5Y1 443 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 TMC7Q7Z402 723 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 SLC35B2Q8TB61 432 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 E2F7Q96AV8 911 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CLMNQ96JQ2 1002 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CCDC17Q96LX7 622 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 SENP7Q9BQF6 1050 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 EBF4Q9BQW3 602 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 SH2D3AQ9BRG2 576 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CCDC160A6NGH7 325 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CLPTM1O96005 669 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CFBP00751 764 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 EPHB1P54762 984 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 RPL26P61254 145 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 PSMC5P62195 406 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CHI3L2Q15782 390 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CRY2Q49AN0 593 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 NADK2Q4G0N4 442 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 TFDP3Q5H9I0 405 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 B3GNT9Q6UX72 402 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 USP6NLQ92738 828 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 CCDC124Q96CT7 223 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 BTBD9Q96Q07 612 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 C20orf27Q9GZN8 174 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 RBM38Q9H0Z9 239 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 NYAP2Q9P242 653 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 ZNRF3Q9ULT6 936 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 SCINQ9Y6U3 715 aa19.41■□□□□ 0.7
ECHDC1-214ENST00000474289 DDX39AO00148 427 aaKnown RBP19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 PDE5AO76074 875 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 AOC1P19801 751 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 ZNF200P98182 395 aaPredicted RBP19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 SULT2A1Q06520 285 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 TLR1Q15399 786 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 CEP55Q53EZ4 464 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 ATG16L1Q676U5 607 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 PDIK1LQ8N165 341 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 ICA1LQ8NDH6 482 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 FEZF2Q8TBJ5 459 aa19.4■□□□□ 0.7
ECHDC1-214ENST00000474289 IRGQQ8WZA9 623 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms