RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TRAV19A0A0A6YYK7 116 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 SLC16A3O15427 465 aaKnown RBP19.81■□□□□ 0.76
CCDC171-206ENST00000474193 RPS9P46781 194 aaKnown RBP19.81■□□□□ 0.76
CCDC171-206ENST00000474193 AMPD2Q01433 879 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 TXNDC8Q6A555 127 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 FILIP1Q7Z7B0 1213 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 C8orf48Q96LL4 319 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 SRRTQ9BXP5 876 aaKnown RBP19.81■□□□□ 0.76
CCDC171-206ENST00000474193 TRPC7Q9HCX4 862 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 DLGAP2Q9P1A6 1054 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 CACNA1HO95180 2353 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 PIEZO1Q92508 2521 aa19.81■□□□□ 0.76
CCDC171-206ENST00000474193 MIA3Q5JRA6 1907 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 AKAP3O75969 853 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 GNA14O95837 355 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 HLA-DRAP01903 254 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 CKMP06732 381 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 TARSP26639 723 aaKnown RBP19.8■□□□□ 0.76
CCDC171-206ENST00000474193 GTF2H1P32780 548 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 NBL1P41271 181 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 CDH8P55286 799 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 PPP2R5DQ14738 602 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 CCDC40Q4G0X9 1142 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 SCARA5Q6ZMJ2 495 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 RALGPS2Q86X27 583 aaPredicted RBP19.8■□□□□ 0.76
CCDC171-206ENST00000474193 NKD2Q969F2 451 aaPredicted RBP19.8■□□□□ 0.76
CCDC171-206ENST00000474193 EXOC4Q96A65 974 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 EEF2KMTQ96G04 330 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 SLITRK1Q96PX8 696 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 DUSP9Q99956 384 aaKnown RBP19.8■□□□□ 0.76
CCDC171-206ENST00000474193 SEMA4AQ9H3S1 761 aa19.8■□□□□ 0.76
CCDC171-206ENST00000474193 METTL14Q9HCE5 456 aaKnown RBP19.8■□□□□ 0.76
CCDC171-206ENST00000474193 MTF2Q9Y483 593 aaPredicted RBP19.8■□□□□ 0.76
CCDC171-206ENST00000474193 ZNF638Q14966 1978 aaKnown RBP19.79■□□□□ 0.76
CCDC171-206ENST00000474193 PROB1E7EW31 1015 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 LRRN2O75325 713 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 VNN1O95497 513 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 PRAMEF12O95522 483 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 PFKLP17858 780 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 GCLMP48507 274 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 LRRC32Q14392 662 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 ZNF268Q14587 947 aaPredicted RBP19.79■□□□□ 0.76
CCDC171-206ENST00000474193 CCDC142Q17RM4 750 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 ITPRIPL2Q3MIP1 535 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 TMEM150AQ86TG1 271 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 UNC93AQ86WB7 457 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 CREBRFQ8IUR6 639 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 STKLD1Q8NE28 680 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 CLDN23Q96B33 292 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 RSPRY1Q96DX4 576 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 PHOX2BQ99453 314 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 IER2Q9BTL4 223 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 SMYD3Q9H7B4 428 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 MMRN2Q9H8L6 949 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 GKN1Q9NS71 199 aa19.79■□□□□ 0.76
CCDC171-206ENST00000474193 NUP210Q8TEM1 1887 aaPredicted RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 F8VP50 259 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 GFRA3O60609 400 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 RTN3O95197 1032 aaPredicted RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 ABL1P00519 1130 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 ASS1P00966 412 aaKnown RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 HDCP19113 662 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 NOP14P78316 857 aaKnown RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 ANO6Q4KMQ2 910 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 KRT39Q6A163 491 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 FAM114A1Q8IWE2 563 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 ZC3H3Q8IXZ2 948 aaKnown RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 TTC16Q8NEE8 873 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 SMG9Q9H0W8 520 aaKnown RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 DPEP3Q9H4B8 488 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 LMAN1LQ9HAT1 526 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 CYP3A43Q9HB55 503 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 TMEM8AQ9HCN3 771 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 ARMCX3Q9UH62 379 aaPredicted RBP19.78■□□□□ 0.76
CCDC171-206ENST00000474193 FBXO4Q9UKT5 387 aa19.78■□□□□ 0.76
CCDC171-206ENST00000474193 CAVIN2O95810 425 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 RAP1GAPP47736 663 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 WDR44Q5JSH3 913 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 TCERG1LQ5VWI1 586 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 C11orf57Q6ZUT1 292 aaPredicted RBP19.77■□□□□ 0.76
CCDC171-206ENST00000474193 FRMD5Q7Z6J6 570 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 ACOT1Q86TX2 421 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 NUP93Q8N1F7 819 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 TTC39CQ8N584 583 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 ENOX1Q8TC92 643 aaKnown RBP19.77■□□□□ 0.76
CCDC171-206ENST00000474193 USP13Q92995 863 aaPredicted RBP19.77■□□□□ 0.76
CCDC171-206ENST00000474193 SMARCD1Q96GM5 515 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 ZFYVE19Q96K21 471 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 B3GNT5Q9BYG0 378 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 GTSE1Q9NYZ3 720 aa19.77■□□□□ 0.76
CCDC171-206ENST00000474193 WDFY4Q6ZS81 3184 aa19.77■□□□□ 0.75
CCDC171-206ENST00000474193 SPECC1L-ADORA2AF8WAN1 911 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 ARNTLO00327 626 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 SP9P0CG40 484 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 TRIM49P0CI25 452 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 TRIM49CP0CI26 452 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 YWHAQP27348 245 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 NR1H3Q13133 447 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 RUNX3Q13761 415 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 PDGFRLQ15198 375 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms