RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CST5P28325 142 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 PPIFP30405 207 aaKnown RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 KRT9P35527 623 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 GCLCP48506 637 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 MCM2P49736 904 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 MTHFSP49914 203 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 LILRA4P59901 499 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 SLFN5Q08AF3 891 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 E2F2Q14209 437 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 NPY5RQ15761 445 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ZNF750Q32MQ0 723 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ARHGAP15Q53QZ3 475 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 FCRL6Q6DN72 434 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 SULT6B1Q6IMI4 303 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 JMJD6Q6NYC1 403 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ZDHHC24Q6UX98 284 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 MAATS1Q7Z4T9 603 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 CLNKQ7Z7G1 428 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 FTSJ3Q8IY81 847 aaKnown RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ELOA2Q8IYF1 753 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 STT3BQ8TCJ2 826 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 BPIFB1Q8TDL5 484 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 SDCCAG3Q96C92 435 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 FAM227BQ96M60 508 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 PTDSS2Q9BVG9 487 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ETAA1Q9NY74 926 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 DNAJB11Q9UBS4 358 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 FBXO9Q9UK97 447 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 HPSEQ9Y251 543 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 DTNAQ9Y4J8 743 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 HS3ST4Q9Y661 456 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ZNF536O15090 1300 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 A0A087WZ62 844 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 NPEPPSL1A6NEC2 478 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 EFCAB8A8MWE9 144 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 TRIAP1O43715 76 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 SRGAP2O75044 1071 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 NTSR2O95665 410 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 GPANK1O95872 356 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 C6P13671 934 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 KCNA2P16389 499 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 MSX2P35548 267 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-212ENST00000473961 AARSP49588 968 aaKnown RBP eCLIP4.88□□□□□ -1.63
BRCA1-212ENST00000473961 DGKEP52429 567 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 TLE2Q04725 743 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 CERCAMQ5T4B2 595 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 TMTC4Q5T4D3 741 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 AGAP9Q5VTM2 703 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 TSHZ3Q63HK5 1081 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 FAAH2Q6GMR7 532 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 SLC30A10Q6XR72 485 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 USP49Q70CQ1 688 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 LRRTM4Q86VH4 590 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 ZFPM1Q8IX07 1006 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 SLC15A3Q8IY34 581 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 OR6Y1Q8NGX8 325 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 FAM89AQ96GI7 184 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 MARS2Q96GW9 593 aaKnown RBP4.88□□□□□ -1.63
BRCA1-212ENST00000473961 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 DNMT3BQ9UBC3 853 aaKnown RBP4.88□□□□□ -1.63
BRCA1-212ENST00000473961 FBXO2Q9UK22 296 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-212ENST00000473961 CRYL1Q9Y2S2 319 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 SH3BP1Q9Y3L3 701 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 SPATA31A3Q5VYP0 1347 aa4.88□□□□□ -1.63
BRCA1-212ENST00000473961 CAPN14A8MX76 684 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 USP1O94782 785 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 PYGLP06737 847 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 PECAM1P16284 738 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 CHRM3P20309 590 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ADD2P35612 726 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ANXA11P50995 505 aaKnown RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 BCAT1P54687 386 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 VAMP2P63027 116 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 NHLH2Q02577 135 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ATP1A4Q13733 1029 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 CCNIQ14094 377 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 HLXQ14774 488 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SPDYE7PQ495Y7 208 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 HYIQ5T013 277 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 RAP1GAP2Q684P5 730 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 NAIF1Q69YI7 327 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ARMC6Q6NXE6 501 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 NFRKBQ6P4R8 1299 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 MOGAT3Q86VF5 341 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SGMS1Q86VZ5 419 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SLC44A2Q8IWA5 706 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 Q8N1X5 172 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SLC30A5Q8TAD4 765 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 CPT1BQ92523 772 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 PPP2R3CQ969Q6 453 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ZDHHC12Q96GR4 267 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 EIF2AK1Q9BQI3 630 aaKnown RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 NUDT22Q9BRQ3 303 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SLC26A6Q9BXS9 759 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 TRIM5Q9C035 493 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms