RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KLK7P49862 253 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 ZNF445P59923 1031 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 TEAD2Q15562 447 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 GOLGA7BQ2TAP0 167 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 CLEC20AQ6ZU45 233 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 NUP93Q8N1F7 819 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 RNF214Q8ND24 703 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 SHC3Q92529 594 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 MCRS1Q96EZ8 462 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
DDX56-209ENST00000473924 SMOQ99835 787 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
DDX56-209ENST00000473924 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
DDX56-209ENST00000473924 TSPAN16Q9UKR8 245 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 CNTN6Q9UQ52 1028 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 ZFP37Q9Y6Q3 630 aaPredicted RBP13.14□□□□□ -0.31
DDX56-209ENST00000473924 MYH10P35580 1976 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 DLL1O00548 723 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 BEST1O76090 585 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
DDX56-209ENST00000473924 GNA15P30679 374 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 ZNF132P52740 706 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 SLC5A3P53794 718 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 BCAT1P54687 386 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 POLR2FP61218 127 aaKnown RBP13.13□□□□□ -0.31
DDX56-209ENST00000473924 USP46P62068 366 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 FANCCQ00597 558 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
DDX56-209ENST00000473924 STILQ15468 1287 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 DPY19L2P1Q6NXN4 242 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 ZDHHC14Q8IZN3 488 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 SHKBP1Q8TBC3 707 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
DDX56-209ENST00000473924 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 GPR88Q9GZN0 384 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 GDE1Q9NZC3 331 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 SIK3Q9Y2K2 1263 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
DDX56-209ENST00000473924 NOTCH4Q99466 2003 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 A0A1B0GTH6 734 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 O00370 1275 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
DDX56-209ENST00000473924 TEX33O43247 280 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 THAP12O43422 761 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 MED7O43513 233 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 MOSPD3O75425 235 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 CALCAP01258 141 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 YWHAQP27348 245 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 UBASH3AP57075 661 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 CYP4F8P98187 520 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 PTK2Q05397 1052 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 BST2Q10589 180 aaKnown RBP13.12□□□□□ -0.31
DDX56-209ENST00000473924 CNGA2Q16280 664 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 UBA3Q8TBC4 463 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 NAP1L5Q96NT1 182 aaPredicted RBP13.12□□□□□ -0.31
DDX56-209ENST00000473924 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 STK33Q9BYT3 514 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 GANQ9H2C0 597 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 FBXO44Q9H4M3 255 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 PNPLA8Q9NP80 782 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDX56-209ENST00000473924 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
DDX56-209ENST00000473924 M0QYV0 167 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 TNFRSF10BO14763 440 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 CYP26A1O43174 497 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 ABL1P00519 1130 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 F11P03951 625 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 TPM3P06753 285 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
DDX56-209ENST00000473924 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 PPP3CCP48454 512 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 BPIFB4P59827 614 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 PDE4CQ08493 712 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 TAF10Q12962 218 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 STXBP5Q5T5C0 1151 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms