RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PEBP4Q96S96 227 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 ERP44Q9BS26 406 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 DCLK3Q9C098 648 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 LRRC19Q9H756 370 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 DDX43Q9NXZ2 648 aaKnown RBP18.93■□□□□ 0.62
VARS2-206ENST00000473916 PHF24Q9UPV7 400 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 SNX24Q9Y343 169 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 LRRD1A4D1F6 860 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 C3orf70A6NLC5 250 aaPredicted RBP18.93■□□□□ 0.62
VARS2-206ENST00000473916 ITGB1P05556 798 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 LCP1P13796 627 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 MIPP30301 263 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 BCAT1P54687 386 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 CUL1Q13616 776 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 PPP2R5EQ16537 467 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 CDO1Q16878 200 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 MDH1BQ5I0G3 518 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 LRRC38Q5VT99 294 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 CD300LGQ6UXG3 332 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 SPOCD1Q6ZMY3 1216 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 PAQR9Q6ZVX9 377 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 RIN2Q8WYP3 895 aaPredicted RBP18.93■□□□□ 0.62
VARS2-206ENST00000473916 CRTAC1Q9NQ79 661 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 CD48P09326 243 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 PDGFRAP16234 1089 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 PTPN1P18031 435 aaKnown RBP18.92■□□□□ 0.62
VARS2-206ENST00000473916 TFE3P19532 575 aaPredicted RBP18.92■□□□□ 0.62
VARS2-206ENST00000473916 GPD1P21695 349 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 OAS2P29728 719 aaKnown RBP18.92■□□□□ 0.62
VARS2-206ENST00000473916 BRCC3P46736 316 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 FAM193AP78312 1265 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 DSTYKQ6XUX3 929 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 RCOR2Q8IZ40 523 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 NDRG1Q92597 394 aaKnown RBP18.92■□□□□ 0.62
VARS2-206ENST00000473916 SCN5AQ14524 2016 aa18.92■□□□□ 0.62
VARS2-206ENST00000473916 FAM187AA6NFU0 413 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 SETSIPP0DME0 302 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 RPL21P46778 160 aaKnown RBP18.91■□□□□ 0.62
VARS2-206ENST00000473916 ZNF143P52747 638 aaPredicted RBP18.91■□□□□ 0.62
VARS2-206ENST00000473916 ATP11AP98196 1134 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 SLC6A3Q01959 620 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 CCDC14Q49A88 953 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 CYP4V2Q6ZWL3 525 aaPredicted RBP18.91■□□□□ 0.62
VARS2-206ENST00000473916 TNIP3Q96KP6 325 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 ADAM33Q9BZ11 813 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 SAGE1Q9NXZ1 904 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 AGPSO00116 658 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 CDKN2BP42772 138 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 FNTAP49354 379 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 HAUS1Q96CS2 278 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 RBM41Q96IZ5 413 aaKnown RBP18.91■□□□□ 0.62
VARS2-206ENST00000473916 RAB17Q9H0T7 212 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 VIPAS39Q9H9C1 493 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 LCMT1Q9UIC8 334 aa18.91■□□□□ 0.62
VARS2-206ENST00000473916 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 C9IYK1 514 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 CAND2O75155 1236 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 B3GAT3O94766 335 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 AARSP49588 968 aaKnown RBP eCLIP18.9■□□□□ 0.62
VARS2-206ENST00000473916 GPNMBQ14956 572 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 CLLU1OSQ5K130 101 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 PRUNE1Q86TP1 453 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 HSPH1Q92598 858 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 DEFB118Q96PH6 123 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 HNRNPABQ99729 332 aaKnown RBP18.9■□□□□ 0.62
VARS2-206ENST00000473916 RGS18Q9NS28 235 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 TMEM30AQ9NV96 361 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 GRHL1Q9NZI5 618 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 MYBPHLA2RUH7 354 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 POLR3GO15318 223 aaPredicted RBP18.9■□□□□ 0.62
VARS2-206ENST00000473916 TRUB2O95900 331 aaKnown RBP18.9■□□□□ 0.62
VARS2-206ENST00000473916 RPL9P32969 192 aaKnown RBP18.9■□□□□ 0.62
VARS2-206ENST00000473916 GGCXP38435 758 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 CACNA2D1P54289 1103 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 PRMT2P55345 433 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 GRIK3Q13003 919 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 TRIP13Q15645 432 aaPredicted RBP18.9■□□□□ 0.62
VARS2-206ENST00000473916 ZDHHC24Q6UX98 284 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 POLNQ7Z5Q5 900 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 PIGZQ86VD9 579 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 STK32AQ8WU08 396 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 PGBD4Q96DM1 585 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 RTP3Q9BQQ7 232 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 SYT15Q9BQS2 421 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 CNPY3Q9BT09 278 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 RHOBTB2Q9BYZ6 727 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 ZDHHC18Q9NUE0 388 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 USP18Q9UMW8 372 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 SQORQ9Y6N5 450 aa18.9■□□□□ 0.62
VARS2-206ENST00000473916 NBNO60934 754 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 ECEL1O95672 775 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 CDK7P50613 346 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 KRT17Q04695 432 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 NNTQ13423 1086 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 TUSC3Q13454 348 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 ARHGEF6Q15052 776 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 LRRC8DQ7L1W4 858 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 ZNF280BQ86YH2 543 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 FAM126BQ8IXS8 530 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms