RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 XYLT1Q86Y38 959 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 CMTR2Q8IYT2 770 aaKnown RBP11.33□□□□□ -0.6
SP140-208ENST00000473711 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
SP140-208ENST00000473711 MYLPFQ96A32 169 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 PCED1BQ96HM7 432 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 YME1L1Q96TA2 773 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 EPAS1Q99814 870 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.33□□□□□ -0.6
SP140-208ENST00000473711 SELENOOQ9BVL4 669 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 TLR10Q9BXR5 811 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 WDR35Q9P2L0 1181 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 ANAPC7Q9UJX3 599 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 STRIP2Q9ULQ0 834 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 MRPL42Q9Y6G3 142 aaKnown RBP11.33□□□□□ -0.6
SP140-208ENST00000473711 SCINQ9Y6U3 715 aa11.33□□□□□ -0.6
SP140-208ENST00000473711 SF3B1O75533 1304 aaKnown RBP eCLIP11.33□□□□□ -0.6
SP140-208ENST00000473711 TCRBV5S1A1TA0A578 114 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 TMEM191CA6NGB0 347 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 SIGLEC16A6NMB1 481 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 E5RJQ4 531 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 MYO1FO00160 1098 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 XPO1O14980 1071 aaKnown RBP11.32□□□□□ -0.6
SP140-208ENST00000473711 SRGAP2O75044 1071 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 AP1G2O75843 785 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 BEST1O76090 585 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 OR4Q2P0C623 313 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 FAM200BP0CF97 657 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 KRT3P12035 628 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 LCP1P13796 627 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 NPR3P17342 541 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 COMTP21964 271 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 BDNFP23560 247 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 RABGGTBP53611 331 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 ARPP19P56211 112 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 MAP3K7CLP57077 242 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 SLC8A3P57103 927 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 SNX16P57768 344 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 RPL7AP62424 266 aaKnown RBP11.32□□□□□ -0.6
SP140-208ENST00000473711 AMPD2Q01433 879 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 MRPL58Q14197 206 aaKnown RBP11.32□□□□□ -0.6
SP140-208ENST00000473711 RPS6KA1Q15418 735 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 CTXN3Q4LDR2 81 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 PSRC1Q6PGN9 363 aaPredicted RBP11.32□□□□□ -0.6
SP140-208ENST00000473711 DCUN1D2Q6PH85 259 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 FAM183BPQ6ZVS7 135 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 NT5DC3Q86UY8 548 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 FAM35AQ86V20 835 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 CPNE8Q86YQ8 564 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 C3orf20Q8ND61 904 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 STK32AQ8WU08 396 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 MCRS1Q96EZ8 462 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 IGSF21Q96ID5 467 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 ZNF558Q96NG5 402 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 PSMB7Q99436 277 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 PKMYT1Q99640 499 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 SMOQ99835 787 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
SP140-208ENST00000473711 RHOBTB2Q9BYZ6 727 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 MIS12Q9H081 205 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 ZCWPW1Q9H0M4 648 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 KRT82Q9NSB4 513 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
SP140-208ENST00000473711 SAR1BQ9Y6B6 198 aa11.32□□□□□ -0.6
SP140-208ENST00000473711 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 H7C4K7 107 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 CXCR5P32302 372 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 ACADSBP45954 432 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 PLA2G4AP47712 749 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 CACNA2D1P54289 1103 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 TAP1Q03518 808 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 MAPRE1Q15691 268 aaKnown RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 SLC39A12Q504Y0 691 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 RTP2Q5QGT7 225 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 FAM102AQ5T9C2 384 aaPredicted RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 C11orf63Q6NUN7 778 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 CLEC20AQ6ZU45 233 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 PIGZQ86VD9 579 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 SCUBE3Q8IX30 993 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 DCP1BQ8IZD4 617 aaKnown RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 COLGALT1Q8NBJ5 622 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 JOSD2Q8TAC2 188 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 HERVK_113Q902F9 699 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 OSBPL9Q96SU4 736 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 KCNK16Q96T55 309 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 TTPALQ9BTX7 342 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 RC3H2Q9HBD1 1191 aaKnown RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 METTL5Q9NRN9 209 aaKnown RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 SNX12Q9UMY4 172 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
SP140-208ENST00000473711 BRCA2P51587 3418 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms