RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 SLC22A12Q96S37 553 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 CYP2S1Q96SQ9 504 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 MMS19Q96T76 1030 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 SNX25Q9H3E2 840 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 COMMD8Q9NX08 183 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 A0A0A0MRY4 1105 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 RNF40O75150 1001 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 ATP2C2O75185 946 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 APBB3O95704 486 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 CST3P01034 146 aaPredicted RBP14.44□□□□□ -0.1
CHD3-209ENST00000473376 MYL1P05976 194 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 ADRB1P08588 477 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 BDNFP23560 247 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 TNNC1P63316 161 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 LPAL2Q16609 132 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 KNOP1Q1ED39 458 aaKnown RBP14.44□□□□□ -0.1
CHD3-209ENST00000473376 WDR72Q3MJ13 1102 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 SNX30Q5VWJ9 437 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 HEATR6Q6AI08 1181 aaKnown RBP14.44□□□□□ -0.1
CHD3-209ENST00000473376 SCARA3Q6AZY7 606 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 SLC9A9Q8IVB4 645 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 ARL14EPQ8N8R7 260 aaPredicted RBP14.44□□□□□ -0.1
CHD3-209ENST00000473376 GLIS3Q8NEA6 775 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 PDZD8Q8NEN9 1154 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 DHX58Q96C10 678 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 OTUB2Q96DC9 234 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 FBRSL1Q9HCM7 1045 aaKnown RBP14.44□□□□□ -0.1
CHD3-209ENST00000473376 TRPC7Q9HCX4 862 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 CFAP45Q9UL16 551 aa14.44□□□□□ -0.1
CHD3-209ENST00000473376 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.44□□□□□ -0.1
CHD3-209ENST00000473376 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 C2orf78A6NCI8 922 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 AXIN1O15169 862 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 RHOBTB1O94844 696 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 RTN3O95197 1032 aaPredicted RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 OAS1P00973 400 aaKnown RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 DLATP10515 647 aaKnown RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 PTPN1P18031 435 aaKnown RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 TUBP50607 506 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 CYP27A1Q02318 531 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 TRPC3Q13507 836 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 TDRD10Q5VZ19 366 aaKnown RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 PKN3Q6P5Z2 889 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 ADGRG2Q8IZP9 1017 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 XYLT2Q9H1B5 865 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 IL37Q9NZH6 218 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 TBC1D14Q9P2M4 693 aa14.43□□□□□ -0.1
CHD3-209ENST00000473376 TFIP11Q9UBB9 837 aaKnown RBP14.43□□□□□ -0.1
CHD3-209ENST00000473376 OBSL1O75147 1896 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 F8VP50 259 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 LEFTY2O00292 366 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 POLR2DO15514 142 aaKnown RBP14.42□□□□□ -0.1
CHD3-209ENST00000473376 HCRTO43612 131 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 PDGFRBP09619 1106 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 CCDC192P0DO97 292 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 PSMC1P62191 440 aaKnown RBP14.42□□□□□ -0.1
CHD3-209ENST00000473376 MRPS21P82921 87 aaKnown RBP14.42□□□□□ -0.1
CHD3-209ENST00000473376 SRSF5Q13243 272 aaKnown RBP14.42□□□□□ -0.1
CHD3-209ENST00000473376 ELF2Q15723 593 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 PLK5Q496M5 336 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 PREPLQ4J6C6 727 aaPredicted RBP14.42□□□□□ -0.1
CHD3-209ENST00000473376 RESP18Q5W5W9 173 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 LMBRD2Q68DH5 695 aaPredicted RBP14.42□□□□□ -0.1
CHD3-209ENST00000473376 NUP93Q8N1F7 819 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 B3GALNT2Q8NCR0 500 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 STKLD1Q8NE28 680 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 OR6B3Q8NGW1 331 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 HPS3Q969F9 1004 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 TNIP3Q96KP6 325 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 VPS45Q9NRW7 570 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 USP25Q9UHP3 1055 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 WNT6Q9Y6F9 365 aa14.42□□□□□ -0.1
CHD3-209ENST00000473376 ATP8B3O60423 1300 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 E2F8A0AVK6 867 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 FAM92AA1XBS5 289 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 DCDC2BA2VCK2 349 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 TM4SF5O14894 197 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 IKBKBO14920 756 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 RPN1P04843 607 aaKnown RBP14.41□□□□□ -0.1
CHD3-209ENST00000473376 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
CHD3-209ENST00000473376 CDR1P51861 262 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 USP46P62068 366 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 ENPEPQ07075 957 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 DMC1Q14565 340 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 MDH1BQ5I0G3 518 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 KBTBD6Q86V97 674 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 RASSF3Q86WH2 238 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 C12orf50Q8NA57 414 aaPredicted RBP14.41□□□□□ -0.1
CHD3-209ENST00000473376 RDH13Q8NBN7 331 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 RPLP0P6Q8NHW5 317 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 PARD3BQ8TEW8 1205 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 USP33Q8TEY7 942 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 ZNF516Q92618 1163 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 TAF4BQ92750 862 aa14.41□□□□□ -0.1
CHD3-209ENST00000473376 EZH1Q92800 747 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms