RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 SLITRK1Q96PX8 696 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 B3GNT5Q9BYG0 378 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 SDCBP2Q9H190 292 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 C8orf33Q9H7E9 229 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-226ENST00000473066 CYP3A43Q9HB55 503 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 DMAP1Q9NPF5 467 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-226ENST00000473066 MAN1B1Q9UKM7 699 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 CACNA1IQ9P0X4 2223 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 CLDN5O00501 218 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 GADD45BO75293 160 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 LRRN2O75325 713 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 RTN3O95197 1032 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 CCNE1P24864 410 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 ASPAP45381 313 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 PPP3CCP48454 512 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 MRE11P49959 708 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 NDST1P52848 882 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 UBE2HP62256 183 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 ZNF268Q14587 947 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 WDR44Q5JSH3 913 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 KLHL10Q6JEL2 608 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 FBXL13Q8NEE6 735 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 DHTKD1Q96HY7 919 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 KRT82Q9NSB4 513 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 SPATA6Q9NWH7 488 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-226ENST00000473066 FANCMQ8IYD8 2048 aa16.57■□□□□ 0.24
MRPL55-226ENST00000473066 BICDL2A1A5D9 508 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 TRIM49BA6NDI0 452 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 LAMTOR5O43504 91 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 AP1G2O75843 785 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 ABL1P00519 1130 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 PFKLP17858 780 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 CD58P19256 250 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 ORC1Q13415 861 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 ANKRD40Q6AI12 368 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 TTC39CQ8N584 583 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 PDZD8Q8NEN9 1154 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 USP13Q92995 863 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-226ENST00000473066 ZFYVE19Q96K21 471 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 TTLL2Q9BWV7 592 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 NT5C1AQ9BXI3 368 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 FAM49BQ9NUQ9 324 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 DLGAP2Q9P1A6 1054 aa16.56■□□□□ 0.24
MRPL55-226ENST00000473066 ARNTLO00327 626 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 BIN1O00499 593 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 CCDC130P13994 396 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 YWHAQP27348 245 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 IFNAR2P48551 515 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 MLLT6P55198 1093 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 INCA1Q0VD86 236 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 LRRC32Q14392 662 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 ITPRIPL2Q3MIP1 535 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 ZC3H14Q6PJT7 736 aaKnown RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 RALGPS2Q86X27 583 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 C1orf210Q8IVY1 113 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 ARL14EPQ8N8R7 260 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 FBXO32Q969P5 355 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 CEP63Q96MT8 703 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 IER2Q9BTL4 223 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 METTL14Q9HCE5 456 aaKnown RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 GKN1Q9NS71 199 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 CTNND2Q9UQB3 1225 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-226ENST00000473066 PIEZO1Q92508 2521 aa16.55■□□□□ 0.24
MRPL55-226ENST00000473066 SPECC1L-ADORA2AF8WAN1 911 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 FAM200BP0CF97 657 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 HDCP19113 662 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 ADORA2BP29275 332 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 CTHP32929 405 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
MRPL55-226ENST00000473066 CACNA2D1P54289 1103 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 USP46P62068 366 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 AMPD2Q01433 879 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 TAF10Q12962 218 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 USP4Q13107 963 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 MTF1Q14872 753 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 PDGFRLQ15198 375 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
MRPL55-226ENST00000473066 FUKQ8N0W3 1084 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 CRYBG2Q8N1P7 616 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 TTC8Q8TAM2 541 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 SLC2A14Q8TDB8 520 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 EXOC4Q96A65 974 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 CLDN23Q96B33 292 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 FAXDC2Q96IV6 333 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 LRRC3BQ96PB8 259 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 PHOX2BQ99453 314 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 APOBEC3GQ9HC16 384 aaKnown RBP16.54■□□□□ 0.24
MRPL55-226ENST00000473066 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
MRPL55-226ENST00000473066 GTSE1Q9NYZ3 720 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms