RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 O00370 1275 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 RTN3O95197 1032 aaPredicted RBP22■■□□□ 1.11
TOP3A-204ENST00000472959 LAMP2P13473 410 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 SP100P23497 879 aaPredicted RBP22■■□□□ 1.11
TOP3A-204ENST00000472959 GABRR2P28476 465 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 SSTR3P32745 418 aaPredicted RBP22■■□□□ 1.11
TOP3A-204ENST00000472959 MAP3K7CLP57077 242 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 MTMR3Q13615 1198 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 CNGA2Q16280 664 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 CLEC20AQ6ZU45 233 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 GAREM2Q75VX8 874 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 NPAS3Q8IXF0 933 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 SHKBP1Q8TBC3 707 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 PCMTD1Q96MG8 357 aaPredicted RBP22■■□□□ 1.11
TOP3A-204ENST00000472959 TTLL2Q9BWV7 592 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 STK33Q9BYT3 514 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 UBXN6Q9BZV1 441 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 GPR88Q9GZN0 384 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 IL21Q9HBE4 155 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 PNPLA8Q9NP80 782 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 FAM207AQ9NSI2 230 aaPredicted RBP22■■□□□ 1.11
TOP3A-204ENST00000472959 HESX1Q9UBX0 185 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 ZMYM5Q9UJ78 669 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 FHOD1Q9Y613 1164 aa22■■□□□ 1.11
TOP3A-204ENST00000472959 A0A1W2PRU2 124 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 MOSPD3O75425 235 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 BEST1O76090 585 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 CEBPBP17676 345 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 USP8P40818 1118 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 FANCCQ00597 558 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 DRAP1Q14919 205 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-204ENST00000472959 LCLAT1Q6UWP7 414 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 ZMIZ2Q8NF64 920 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 NEK11Q8NG66 645 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 ING5Q8WYH8 240 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 TFAP2BQ92481 460 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 NECAB3Q96P71 396 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-204ENST00000472959 GANQ9H2C0 597 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 ATXN3LQ9H3M9 355 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 AJAP1Q9UKB5 411 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-204ENST00000472959 TSPAN16Q9UKR8 245 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 C2orf16Q68DN1 1984 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 A0A0C4DFX4 3053 aa21.99■■□□□ 1.11
TOP3A-204ENST00000472959 SOBPA7XYQ1 873 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 FOXN3O00409 490 aaPredicted RBP21.98■■□□□ 1.11
TOP3A-204ENST00000472959 TNFRSF10BO14763 440 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 F11P03951 625 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 PPP3CCP48454 512 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 KLK7P49862 253 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 BCAT1P54687 386 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 BPIFB4P59827 614 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 RAPGEF1Q13905 1077 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 NR1I3Q14994 352 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 TEAD2Q15562 447 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 GOLGA7BQ2TAP0 167 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 ARHGAP15Q53QZ3 475 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 FAM71AQ8IYT1 594 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 STKLD1Q8NE28 680 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 NAP1L5Q96NT1 182 aaPredicted RBP21.98■■□□□ 1.11
TOP3A-204ENST00000472959 IL37Q9NZH6 218 aa21.98■■□□□ 1.11
TOP3A-204ENST00000472959 A0A1W2PQC6 194 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 TEX33O43247 280 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 MED7O43513 233 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 BRD2P25440 801 aaKnown RBP21.97■■□□□ 1.11
TOP3A-204ENST00000472959 YWHAQP27348 245 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 SLC5A3P53794 718 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 USP46P62068 366 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 PTK2Q05397 1052 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 TTC30AQ86WT1 665 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 SLITRK1Q96PX8 696 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 ZSWIM1Q9BR11 485 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 FBXO44Q9H4M3 255 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 LIMD1Q9UGP4 676 aa21.97■■□□□ 1.11
TOP3A-204ENST00000472959 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.97■■□□□ 1.11
TOP3A-204ENST00000472959 HHLA1C9JL84 531 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 CYP26A1O43174 497 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 SETSIPP0DME0 302 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 GJA1P17302 382 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 DDX6P26196 483 aaKnown RBP eCLIP21.96■■□□□ 1.11
TOP3A-204ENST00000472959 GNA15P30679 374 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 UBASH3AP57075 661 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 POLR2FP61218 127 aaKnown RBP21.96■■□□□ 1.11
TOP3A-204ENST00000472959 BST2Q10589 180 aaKnown RBP21.96■■□□□ 1.11
TOP3A-204ENST00000472959 MEA1Q16626 185 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 TMEM150AQ86TG1 271 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 MRPS31Q92665 395 aaKnown RBP21.96■■□□□ 1.11
TOP3A-204ENST00000472959 NXPE3Q969Y0 559 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 MCRS1Q96EZ8 462 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 ANP32EQ9BTT0 268 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 DENND4AQ7Z401 1863 aa21.96■■□□□ 1.11
TOP3A-204ENST00000472959 FAM92AA1XBS5 289 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 F8VZ95 297 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 NRG2O14511 850 aaPredicted RBP21.95■■□□□ 1.1
TOP3A-204ENST00000472959 XPO1O14980 1071 aaKnown RBP21.95■■□□□ 1.1
TOP3A-204ENST00000472959 TAF10Q12962 218 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 PKDCCQ504Y2 493 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 MTSS1LQ765P7 747 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 RNF214Q8ND24 703 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 PDZD8Q8NEN9 1154 aa21.95■■□□□ 1.1
TOP3A-204ENST00000472959 SCAMP5Q8TAC9 235 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms