RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
VTI1A-203ENST00000472892 OSCP1Q8WVF1 389 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
VTI1A-203ENST00000472892 RMDN1Q96DB5 314 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 KCTD10Q9H3F6 313 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 EXOC1Q9NV70 894 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 NXF1Q9UBU9 619 aaKnown RBP16.31■□□□□ 0.2
VTI1A-203ENST00000472892 KIF26AQ9ULI4 1882 aaPredicted RBP16.31■□□□□ 0.2
VTI1A-203ENST00000472892 LRRIQ3A6PVS8 624 aaPredicted RBP16.3■□□□□ 0.2
VTI1A-203ENST00000472892 A8MXQ7 604 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 CHURC1-FNTBB4DL54 471 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 F8VP50 259 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 PDXKO00764 312 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 HRO43593 1189 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 PHACTR2O75167 634 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 CKMP06732 381 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 TGM1P22735 817 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 CNR2P34972 360 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 PPP3CCP48454 512 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 FNTBP49356 437 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 PDE6CP51160 858 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 GALK1P51570 392 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 KRT85P78386 507 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
VTI1A-203ENST00000472892 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
VTI1A-203ENST00000472892 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 CHAMP1Q96JM3 812 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 DPEP3Q9H4B8 488 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 ECT2Q9H8V3 914 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 FBRSL1Q9HCM7 1045 aaKnown RBP16.3■□□□□ 0.2
VTI1A-203ENST00000472892 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
VTI1A-203ENST00000472892 TRPM5Q9NZQ8 1165 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 ARHGAP26Q9UNA1 814 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
VTI1A-203ENST00000472892 OBSL1O75147 1896 aa16.3■□□□□ 0.2
VTI1A-203ENST00000472892 ZNF840PA6NDX5 716 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 RPN1P04843 607 aaKnown RBP16.29■□□□□ 0.2
VTI1A-203ENST00000472892 GJA4P35212 333 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 USP4Q13107 963 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 BIRC3Q13489 604 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 KCNB1Q14721 858 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 EML3Q32P44 896 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 CPA6Q8N4T0 437 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 B3GALNT2Q8NCR0 500 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 SH3RF2Q8TEC5 729 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 B3GNT5Q9BYG0 378 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 ELOVL4Q9GZR5 314 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 TMEM30AQ9NV96 361 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 DMXL1Q9Y485 3027 aa16.29■□□□□ 0.2
VTI1A-203ENST00000472892 ATG13O75143 517 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 VNN1O95497 513 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 NR3C1P04150 777 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 DRD1P21728 446 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 SYKP43405 635 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 NDUFA8P51970 172 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 CDH8P55286 799 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 DLG4P78352 724 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 ZXDBP98169 803 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 NCOA4Q13772 614 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 LAIR1Q6GTX8 287 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 KIAA1958Q8N8K9 716 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 ATP2A3Q93084 1043 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 P2RY13Q9BPV8 354 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 ZNF518BQ9C0D4 1074 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 LINC00597Q9H2U6 94 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 DLL3Q9NYJ7 618 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 GMEB2Q9UKD1 530 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 WNT6Q9Y6F9 365 aa16.28■□□□□ 0.2
VTI1A-203ENST00000472892 GREB1Q4ZG55 1949 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 DNAH14Q0VDD8 3507 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 CLDN5O00501 218 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 IKBKBO14920 756 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 OLFM2O95897 454 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 EGFP01133 1207 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 HOXC13P31276 330 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 IFNAR2P48551 515 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 SLC7A9P82251 487 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 TAF10Q12962 218 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 SIM2Q14190 667 aaPredicted RBP16.27■□□□□ 0.2
VTI1A-203ENST00000472892 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
VTI1A-203ENST00000472892 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 ZACNQ401N2 412 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 WDR5BQ86VZ2 330 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 RNF38Q9H0F5 515 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 SDCBP2Q9H190 292 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 SMYD3Q9H7B4 428 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 RAB23Q9ULC3 237 aa16.27■□□□□ 0.2
VTI1A-203ENST00000472892 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
VTI1A-203ENST00000472892 A0A1W2PQ27 194 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 A0A1W2PQ64 194 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms