RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PAN2Q504Q3 1202 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 MARCH8Q5T0T0 291 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 E4F1Q66K89 784 aaPredicted RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 ZC3H14Q6PJT7 736 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 MTHFD1LQ6UB35 978 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 CYP26C1Q6V0L0 522 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 CYB5R4Q7L1T6 521 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 FANCBQ8NB91 859 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 RDM1Q8NG50 284 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SUSD6Q92537 303 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 STAMQ92783 540 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ATOH1Q92858 354 aaPredicted RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 MAP4K1Q92918 833 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 BORCS6Q96GS4 357 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SGSM3Q96HU1 749 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 RPGRIP1Q96KN7 1286 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ADAM2Q99965 735 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SYT3Q9BQG1 590 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ANO3Q9BYT9 981 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 CCDC113Q9H0I3 377 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SEMA4AQ9H3S1 761 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SFXN1Q9H9B4 322 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 AGO4Q9HCK5 861 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 C6orf50Q9HD87 102 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ALG13Q9NP73 1137 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 ZNF302Q9NR11 478 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 CHST12Q9NRB3 414 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 TMEM260Q9NX78 707 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 BARHL2Q9NY43 387 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 PPARGC1AQ9UBK2 798 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 BARX2Q9UMQ3 279 aaPredicted RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 WASF3Q9UPY6 502 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 GINS2Q9Y248 185 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 PCDHA8Q9Y5H6 950 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 PCDHA10Q9Y5I2 948 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 BRWD1Q9NSI6 2320 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 IGKV6D-21A0A0A0MT36 114 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 A0A1W2PQJ5 194 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 PROB1E7EW31 1015 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 PDPK1O15530 556 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 ATP9AO75110 1047 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 CSPG5O95196 566 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 C22orf31O95567 290 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 C1RP00736 705 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 FUCA1P04066 466 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 ASGR2P07307 311 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 CYP3A4P08684 503 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 NAT2P11245 290 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 FGFR1P11362 822 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 GSPT1P15170 499 aaKnown RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 KLRC1P26715 233 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 TECP42680 631 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 JAK3P52333 1124 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 TMEM62Q0P6H9 643 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 CAMK1Q14012 370 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 ATAT1Q5SQI0 421 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 PLPP4Q5VZY2 271 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 WWC2Q6AWC2 1192 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 KIAA1841Q6NSI8 718 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 ANKRD54Q6NXT1 300 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 KCNT2Q6UVM3 1135 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 GLB1LQ6UWU2 654 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 C15orf39Q6ZRI6 1047 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 CCDC149Q6ZUS6 474 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 OTOP3Q7RTS5 596 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 RBM23Q86U06 439 aaKnown RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 ZNF410Q86VK4 478 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 HACE1Q8IYU2 909 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 SRBD1Q8N5C6 995 aaKnown RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 LZTR1Q8N653 840 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 METTL13Q8N6R0 699 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 COLGALT1Q8NBJ5 622 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 NETO2Q8NC67 525 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 URGCPQ8TCY9 931 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 IGDCC4Q8TDY8 1250 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 PIBF1Q8WXW3 757 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 NKD2Q969F2 451 aaPredicted RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 ZNF669Q96BR6 464 aaPredicted RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 PGBD4Q96DM1 585 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 RTP3Q9BQQ7 232 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 ZNF577Q9BSK1 485 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 IER2Q9BTL4 223 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 GCOM2Q9BZD3 368 aaPredicted RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 AGO3Q9H9G7 860 aaKnown RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 ERVK-5Q9HDB9 667 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 UBN1Q9NPG3 1134 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 NRBP2Q9NSY0 501 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 SPG21Q9NZD8 308 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 DBR1Q9UK59 544 aaKnown RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 ST3GAL5Q9UNP4 418 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 RBM8AQ9Y5S9 174 aaKnown RBP3.92□□□□□ -1.78
XRN1-209ENST00000472625 TET1Q8NFU7 2136 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 CNTNAP2Q9UHC6 1331 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 VPS13AQ96RL7 3174 aa3.92□□□□□ -1.78
XRN1-209ENST00000472625 PTPRSQ13332 1948 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 TCF20Q9UGU0 1960 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 TRBV23OR9-2A0A075B6M9 112 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 A0A0U1RQF3 1178 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms