RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 RRAGBQ5VZM2 374 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 UNQ6494/PRO21346Q6UXR6 183 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 PDILTQ8N807 584 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 TXNDC5Q8NBS9 432 aaKnown RBP10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 CXorf38Q8TB03 319 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 CACTINQ8WUQ7 758 aaKnown RBP10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 ATP2A3Q93084 1043 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 WBP2Q969T9 261 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 DNAJC19Q96DA6 116 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 CCSER1Q9C0I3 900 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 DPEP3Q9H4B8 488 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 TMEM74BQ9NUR3 256 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 BCCIPQ9P287 314 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 CFAP97Q9P2B7 532 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 UXTQ9UBK9 157 aaPredicted RBP10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 PCDHGA5Q9Y5G8 931 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 DENND4CQ5VZ89 1909 aa10.81□□□□□ -0.68
SCAMP3-205ENST00000472397 THADAQ6YHU6 1953 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 HYAL3O43820 417 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 FOXD2O60548 495 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 CYP17A1P05093 508 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 PAX3P23760 479 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 PNPLA4P41247 253 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 PTGER3P43115 390 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 SMARCB1Q12824 385 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 NR1H3Q13133 447 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 COL9A2Q14055 689 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 ZNF268Q14587 947 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 POSTNQ15063 836 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 SV2BQ7L1I2 683 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 HMGB4Q8WW32 186 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 ACDQ96AP0 544 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 HPDLQ96IR7 371 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 STRA6Q9BX79 667 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 TMEM206Q9H813 350 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 TMEM9BQ9NQ34 198 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 PANK4Q9NVE7 773 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 TRPM5Q9NZQ8 1165 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 MBD1Q9UIS9 605 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 FBXO2Q9UK22 296 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 R3HCC1Q9Y3T6 440 aaKnown RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 CFAP47Q6ZTR5 3102 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 FRYQ5TBA9 3013 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 MYO16Q9Y6X6 1858 aa10.8□□□□□ -0.68
SCAMP3-205ENST00000472397 F8VP50 259 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 CLIC2O15247 247 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 AKAP3O75969 853 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 NFATC1O95644 943 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 CST3P01034 146 aaPredicted RBP10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 MBL2P11226 248 aaPredicted RBP10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 ANXA13P27216 316 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 ORC1Q13415 861 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 DHCR24Q15392 516 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 FBXO43Q4G163 708 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 TRIM61Q5EBN2 209 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 DAB2IPQ5VWQ8 1189 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 FAM171BQ6P995 826 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 KCTD17Q8N5Z5 321 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 TOP6BLQ8N6T0 577 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 OR6B3Q8NGW1 331 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 LEO1Q8WVC0 666 aaPredicted RBP10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 KCNN1Q92952 543 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 TRMT2BQ96GJ1 504 aaKnown RBP10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 PCED1BQ96HM7 432 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 MYRFLQ96LU7 910 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 SCNM1Q9BWG6 230 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 TRIM9Q9C026 710 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 ZNF518BQ9C0D4 1074 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 ST6GALNAC4Q9H4F1 302 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 TMEM30AQ9NV96 361 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 CCDC39Q9UFE4 941 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 CHORDC1Q9UHD1 332 aaPredicted RBP10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 MMP17Q9ULZ9 603 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 ARHGAP26Q9UNA1 814 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 EXOC7Q9UPT5 735 aa10.79□□□□□ -0.68
SCAMP3-205ENST00000472397 TCRBV21S2A2A0A5A6 115 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 ZNF840PA6NDX5 716 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 GABRDO14764 452 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 EIF5BO60841 1220 aaKnown RBP10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 TNNC2P02585 160 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 CFIP05156 583 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 DLATP10515 647 aaKnown RBP10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 ITPKAP23677 461 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 PCSK1P29120 753 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 CASP1P29466 404 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 STAT6P42226 847 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 LHX1P48742 406 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 FAM193AP78312 1265 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 SHC2P98077 582 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 TAF10Q12962 218 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 CRY1Q16526 586 aa10.78□□□□□ -0.68
SCAMP3-205ENST00000472397 FOXD4L5Q5VV16 416 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms