RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 LEMD2Q8NC56 503 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 B3GALNT2Q8NCR0 500 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 SHKBP1Q8TBC3 707 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 SLC35C1Q96A29 364 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 RAB20Q9NX57 234 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 HSFX1Q9UBD0 423 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 DACH1Q9UI36 760 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 ASB3Q9Y575 518 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 NUMBLQ9Y6R0 609 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
CLRN1-205ENST00000472224 CLDN5O00501 218 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 GNA14O95837 355 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ANXA13P27216 316 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 GABRR2P28476 465 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 GRIK1P39086 918 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 FMO5P49326 533 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 NLRP12P59046 1061 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 LRMPQ12912 555 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 FAM171BQ6P995 826 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 MTSS1LQ765P7 747 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ACOT1Q86TX2 421 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 C1orf210Q8IVY1 113 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 MYCBPAPQ8TBZ2 947 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLRN1-205ENST00000472224 TNIP3Q96KP6 325 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 CNOT6LQ96LI5 555 aaKnown RBP12.63□□□□□ -0.39
CLRN1-205ENST00000472224 KXD1Q9BQD3 176 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ZNF518BQ9C0D4 1074 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ATXN3LQ9H3M9 355 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
CLRN1-205ENST00000472224 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 IGSF9Q9P2J2 1179 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ZFP37Q9Y6Q3 630 aaPredicted RBP12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ATRXP46100 2492 aa12.63□□□□□ -0.39
CLRN1-205ENST00000472224 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 ZZEF1O43149 2961 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 SLC38A8A6NNN8 435 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 FAM163BP0C2L3 166 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 CCDC130P13994 396 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 MAGEA11P43364 429 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 EPHA5P54756 1037 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 CYP4F8P98187 520 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 IFRD2Q12894 506 aaPredicted RBP12.62□□□□□ -0.39
CLRN1-205ENST00000472224 HTR4Q13639 388 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 CFAP221Q4G0U5 840 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 ARHGAP15Q53QZ3 475 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 STXBP5Q5T5C0 1151 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 PARM1Q6UWI2 310 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 FGF14Q92915 247 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 ARID3AQ99856 593 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 B3GNT5Q9BYG0 378 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 BCO2Q9BYV7 579 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 ELOVL4Q9GZR5 314 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 CYP3A43Q9HB55 503 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 NCDNQ9UBB6 729 aa12.62□□□□□ -0.39
CLRN1-205ENST00000472224 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLRN1-205ENST00000472224 HELZP42694 1942 aaKnown RBP12.61□□□□□ -0.39
CLRN1-205ENST00000472224 F8VP50 259 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 TRIM66O15016 1216 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 MOSPD3O75425 235 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 FGF19O95750 216 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 CSH1P0DML2 217 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 CSH2P0DML3 217 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 SDHBP21912 280 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 TGM1P22735 817 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 ADORA2BP29275 332 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 CDC25CP30307 473 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 MTIF2P46199 727 aaKnown RBP12.61□□□□□ -0.39
CLRN1-205ENST00000472224 CETN1Q12798 172 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 ZNF394Q53GI3 561 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 HSP90AA4PQ58FG1 418 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 GPR158Q5T848 1215 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 SASS6Q6UVJ0 657 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 GAREM2Q75VX8 874 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 ZSCAN18Q8TBC5 510 aaPredicted RBP12.61□□□□□ -0.39
CLRN1-205ENST00000472224 TATDN2Q93075 761 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 RPP25Q9BUL9 199 aaKnown RBP12.61□□□□□ -0.39
CLRN1-205ENST00000472224 LRRC3Q9BY71 257 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 KRT82Q9NSB4 513 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 CDV3Q9UKY7 258 aaKnown RBP12.61□□□□□ -0.39
CLRN1-205ENST00000472224 SIT1Q9Y3P8 196 aa12.61□□□□□ -0.39
CLRN1-205ENST00000472224 TICRRQ7Z2Z1 1910 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 CILPO75339 1184 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 AP1G2O75843 785 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
CLRN1-205ENST00000472224 SRFP11831 508 aa12.6□□□□□ -0.39
CLRN1-205ENST00000472224 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms