RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 DDX56Q9NY93 547 aaKnown RBP15.78■□□□□ 0.12
UBXN11-213ENST00000472155 EURLQ9NYK6 297 aa15.78■□□□□ 0.12
UBXN11-213ENST00000472155 FLRT1Q9NZU1 646 aa15.78■□□□□ 0.12
UBXN11-213ENST00000472155 CAPN7Q9Y6W3 813 aa15.78■□□□□ 0.12
UBXN11-213ENST00000472155 SPAG7O75391 227 aa15.77■□□□□ 0.12
UBXN11-213ENST00000472155 TRUB2O95900 331 aaKnown RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 BRAFP15056 766 aa15.77■□□□□ 0.12
UBXN11-213ENST00000472155 ATXN1P54253 815 aaKnown RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 ZNF268Q14587 947 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 ZC3H12AQ5D1E8 599 aaKnown RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 ZC3H18Q86VM9 953 aaKnown RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 PRCCQ92733 491 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 EMID1Q96A84 441 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
UBXN11-213ENST00000472155 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
UBXN11-213ENST00000472155 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.77■□□□□ 0.12
UBXN11-213ENST00000472155 KIAA0754O94854 1291 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 ITGAVP06756 1048 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 VDRP11473 427 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 RPL22P35268 128 aaKnown RBP15.77■□□□□ 0.11
UBXN11-213ENST00000472155 GABRB2P47870 512 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 CTCFP49711 727 aaPredicted RBP15.77■□□□□ 0.11
UBXN11-213ENST00000472155 COPS2P61201 443 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 PDIA2Q13087 525 aaKnown RBP15.77■□□□□ 0.11
UBXN11-213ENST00000472155 GRB14Q14449 540 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 POLNQ7Z5Q5 900 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 CPT1BQ92523 772 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 CPA4Q9UI42 421 aa15.77■□□□□ 0.11
UBXN11-213ENST00000472155 DRG1Q9Y295 367 aaKnown RBP15.77■□□□□ 0.11
UBXN11-213ENST00000472155 GPR32O75388 356 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 TMEM63AO94886 807 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 PDGFRAP16234 1089 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 PTPN7P35236 360 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 GPX6P59796 221 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 RBP5P82980 135 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 INCA1Q0VD86 236 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 CA9Q16790 459 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 BBS12Q6ZW61 710 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 CACNA2D3Q8IZS8 1091 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 KHSRPQ92945 711 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBXN11-213ENST00000472155 MIS12Q9H081 205 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 C2CD4BA6NLJ0 364 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 VGLL3A8MV65 326 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 TCP11X1B4DZS4 312 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 PDGFRBP09619 1106 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 SSTR1P30872 391 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 ATICP31939 592 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 GCLCP48506 637 aaPredicted RBP15.76■□□□□ 0.11
UBXN11-213ENST00000472155 GKAP1Q5VSY0 366 aaPredicted RBP15.76■□□□□ 0.11
UBXN11-213ENST00000472155 SESTD1Q86VW0 696 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 FNIP1Q8TF40 1166 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 VPS37BQ9H9H4 285 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 FGFR1OP2Q9NVK5 253 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 CACNG4Q9UBN1 327 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 ITGA11Q9UKX5 1188 aa15.76■□□□□ 0.11
UBXN11-213ENST00000472155 SPTLC1O15269 473 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 HMGCRP04035 888 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 KRT7P08729 469 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CDH6P55285 790 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 ZKSCAN8Q15776 578 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CCL14Q16627 93 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 TAZQ16635 292 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CCDC14Q49A88 953 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 SCYL2Q6P3W7 929 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 C1orf228Q6PIY5 440 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 TAOK1Q7L7X3 1001 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CATSPER4Q7RTX7 472 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CMASQ8NFW8 434 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-213ENST00000472155 PPM1EQ8WY54 764 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 MAML1Q92585 1016 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 NT5C1AQ9BXI3 368 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CYP3A43Q9HB55 503 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 MORF4L1Q9UBU8 362 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 C2CD2Q9Y426 696 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 FARP1Q9Y4F1 1045 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-213ENST00000472155 CLUHO75153 1309 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 EXOC1LA0A1B0GW35 172 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 SMIM10L2AP0DMW4 78 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 SMIM10L2BP0DMW5 78 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 LMO2P25791 158 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 GRM5P41594 1212 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
UBXN11-213ENST00000472155 DGKDQ16760 1214 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 HADHQ16836 314 aaKnown RBP15.75■□□□□ 0.11
UBXN11-213ENST00000472155 OLFML2BQ68BL8 750 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 LCLAT1Q6UWP7 414 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 C7orf31Q8N865 590 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 DNAJB3Q8WWF6 145 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 PCDH9Q9HC56 1237 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-213ENST00000472155 SLC5A4Q9NY91 659 aa15.75■□□□□ 0.11
UBXN11-213ENST00000472155 FGFR1P11362 822 aa15.74■□□□□ 0.11
UBXN11-213ENST00000472155 CCDC130P13994 396 aa15.74■□□□□ 0.11
UBXN11-213ENST00000472155 GTF2A2P52657 109 aa15.74■□□□□ 0.11
UBXN11-213ENST00000472155 ZNF143P52747 638 aaPredicted RBP15.74■□□□□ 0.11
UBXN11-213ENST00000472155 EIF3EP60228 445 aaKnown RBP15.74■□□□□ 0.11
UBXN11-213ENST00000472155 BEX3Q00994 111 aa15.74■□□□□ 0.11
UBXN11-213ENST00000472155 LMNB2Q03252 620 aa15.74■□□□□ 0.11
UBXN11-213ENST00000472155 RELL1Q8IUW5 271 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms