RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.37
IRF1-208ENST00000472045 TRAF3IP3Q9Y228 551 aa12.77□□□□□ -0.37
IRF1-208ENST00000472045 HES2Q9Y543 173 aa12.77□□□□□ -0.37
IRF1-208ENST00000472045 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
IRF1-208ENST00000472045 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 CASP8Q14790 479 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
IRF1-208ENST00000472045 PHLDB3Q6NSJ2 640 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 SH3BP5LQ7L8J4 393 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 OOSP2Q86WS3 158 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 LPPQ93052 612 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 RRN3Q9NYV6 651 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 AP4E1Q9UPM8 1137 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 KIF3CO14782 793 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
IRF1-208ENST00000472045 FGBP02675 491 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 PYGLP06737 847 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 GEMIN4P57678 1058 aaKnown RBP12.76□□□□□ -0.37
IRF1-208ENST00000472045 USP41Q3LFD5 358 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 SPATS2Q86XZ4 545 aaKnown RBP12.76□□□□□ -0.37
IRF1-208ENST00000472045 ELMO2Q96JJ3 720 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 CYTH2Q99418 400 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 RNF19AQ9NV58 838 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 ANKRD63C9JTQ0 380 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 AOC2O75106 756 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 BDNFP23560 247 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 NDUFV1P49821 464 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 TBCCQ15814 346 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 RETSATQ6NUM9 610 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 C1orf186Q6ZWK4 172 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 KIAA0895Q8NCT3 520 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 SERPINB11Q96P15 392 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 CASS4Q9NQ75 786 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
IRF1-208ENST00000472045 GPATCH2LQ9NWQ4 482 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 C2orf81A6NN90 581 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 CAPSQ13938 189 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 COL1A2P08123 1366 aa12.76□□□□□ -0.37
IRF1-208ENST00000472045 CCDC195A0A1B0GUA6 201 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 SMIM35A0A1B0GVV1 85 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 DDX5P17844 614 aaKnown RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 SPATA4Q8NEY3 305 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 RXFP2Q8WXD0 754 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 INPP4AQ96PE3 977 aaPredicted RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 FAM96AQ9H5X1 160 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 F8VZ95 297 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 TSPAN3O60637 253 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 CENPCQ03188 943 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 TTC31Q49AM3 519 aaPredicted RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 SLC47A2Q86VL8 602 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 ABRAQ8N0Z2 381 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 FAM71DQ8N9W8 422 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 ASAH2Q9NR71 780 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 MRPS23Q9Y3D9 190 aaKnown RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 SPTLC1O15269 473 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 ZNF284Q2VY69 593 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 HAS1Q92839 578 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 RMDN2Q96LZ7 410 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 GPR20Q99678 358 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 DCLK3Q9C098 648 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 NSMCE4AQ9NXX6 385 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 GIT1Q9Y2X7 761 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 CFLARO15519 480 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 POLBP06746 335 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 NUMBP49757 651 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 CDH8P55286 799 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 USP10Q14694 798 aaKnown RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 MAF1Q9H063 256 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 CPSF2Q9P2I0 782 aaKnown RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 LMO7Q8WWI1 1683 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 FGRP09769 529 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 GZMAP12544 262 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 KCNA2P16389 499 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 PTENP60484 403 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 WSCD1Q658N2 575 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 KCNK18Q7Z418 384 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 LMNTD2Q8IXW0 634 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
IRF1-208ENST00000472045 BAIAP2L1Q9UHR4 511 aa12.75□□□□□ -0.37
IRF1-208ENST00000472045 PEX10O60683 326 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 PAEPP09466 180 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 ITIH2P19823 946 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 PAX3P23760 479 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 APLP1P51693 650 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 YWHAZP63104 245 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 GRIK3Q13003 919 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms